RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 POLIQ9UNA4 740 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 A0A1B0GUA9 196 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 LIASO43766 372 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 B4GALT4O60513 344 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 TNNC2P02585 160 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 HOXC8P31273 242 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 PCBP1Q15365 356 aaKnown RBP eCLIP15.82■□□□□ 0.128e-7■■□□□ 13.6
TPM3-208ENST00000341485 KCNA10Q16322 511 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 DCAF4L1Q3SXM0 396 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 CYP4A22Q5TCH4 519 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 TXNRD3NBQ6F5E7 133 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 CPLX4Q7Z7G2 160 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 TMEM192Q8IY95 271 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 CCDC89Q8N998 374 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 PXYLP1Q8TE99 480 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 SERPINB12Q96P63 405 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 ZNF518BQ9C0D4 1074 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 INTS9Q9NV88 658 aaKnown RBP15.82■□□□□ 0.12
TPM3-208ENST00000341485 TMEM51Q9NW97 253 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 TRIP12Q14669 1992 aaPredicted RBP15.82■□□□□ 0.12
TPM3-208ENST00000341485 M0QZ92 97 aa15.81■□□□□ 0.12
TPM3-208ENST00000341485 FSBPO95073 299 aa15.81■□□□□ 0.12
TPM3-208ENST00000341485 EIF4BP23588 611 aaKnown RBP15.81■□□□□ 0.12
TPM3-208ENST00000341485 CETN2P41208 172 aa15.81■□□□□ 0.12
TPM3-208ENST00000341485 CNGA2Q16280 664 aa15.81■□□□□ 0.12
TPM3-208ENST00000341485 LRRC38Q5VT99 294 aa15.81■□□□□ 0.12
TPM3-208ENST00000341485 DENND1BQ6P3S1 775 aa15.81■□□□□ 0.12
TPM3-208ENST00000341485 DCUN1D2Q6PH85 259 aa15.81■□□□□ 0.12
TPM3-208ENST00000341485 SPOCD1Q6ZMY3 1216 aa15.81■□□□□ 0.12
TPM3-208ENST00000341485 CACNA2D3Q8IZS8 1091 aa15.81■□□□□ 0.12
TPM3-208ENST00000341485 PCSK9Q8NBP7 692 aaKnown RBP15.81■□□□□ 0.12
TPM3-208ENST00000341485 BBOF1Q8ND07 529 aa15.81■□□□□ 0.12
TPM3-208ENST00000341485 DNPEPQ9ULA0 475 aa15.81■□□□□ 0.12
TPM3-208ENST00000341485 NPTXRO95502 500 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 ATF7P17544 494 aaPredicted RBP15.8■□□□□ 0.12
TPM3-208ENST00000341485 RAP1GAPP47736 663 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 SNX17Q15036 470 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 ZFYVE27Q5T4F4 411 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 GKAP1Q5VSY0 366 aaPredicted RBP15.8■□□□□ 0.12
TPM3-208ENST00000341485 HIBCHQ6NVY1 386 aaPredicted RBP15.8■□□□□ 0.12
TPM3-208ENST00000341485 NOTUMQ6P988 496 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 TAOK1Q7L7X3 1001 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 RSPH3Q86UC2 560 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 ERICH1Q86X53 443 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 TMEM130Q8N3G9 435 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 GLIS1Q8NBF1 620 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 KLHDC9Q8NEP7 349 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 ZNF296Q8WUU4 475 aaPredicted RBP15.8■□□□□ 0.12
TPM3-208ENST00000341485 ACSF2Q96CM8 615 aaPredicted RBP15.8■□□□□ 0.12
TPM3-208ENST00000341485 PRMT1Q99873 361 aaKnown RBP15.8■□□□□ 0.12
TPM3-208ENST00000341485 CCDC134Q9H6E4 229 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 CTNNAL1Q9UBT7 734 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 SCN10AQ9Y5Y9 1956 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 LACTBL1A8MY62 500 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 CST5P28325 142 aaPredicted RBP15.8■□□□□ 0.12
TPM3-208ENST00000341485 CRYBB1P53674 252 aaPredicted RBP15.8■□□□□ 0.12
TPM3-208ENST00000341485 TAP1Q03518 808 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 MAP3K21Q5TCX8 1036 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 GDF6Q6KF10 455 aaPredicted RBP15.8■□□□□ 0.12
TPM3-208ENST00000341485 SLC27A1Q6PCB7 646 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 GSTA5Q7RTV2 222 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 RNF180Q86T96 592 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 NIPA2Q8N8Q9 360 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 CABS1Q96KC9 395 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 ACAP3Q96P50 834 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 SAGE1Q9NXZ1 904 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 NXF1Q9UBU9 619 aaKnown RBP15.8■□□□□ 0.12
TPM3-208ENST00000341485 SIX4Q9UIU6 781 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 CAPN7Q9Y6W3 813 aa15.8■□□□□ 0.12
TPM3-208ENST00000341485 hCG_1818297A0A087WSY0 165 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 TCEA3O75764 348 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 TJP3O95049 919 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 CREB1P16220 341 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 AXLP30530 894 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 PTPN7P35236 360 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 PIGHQ14442 188 aaPredicted RBP15.79■□□□□ 0.12
TPM3-208ENST00000341485 P3H1Q32P28 736 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 PTPN20Q4JDL3 420 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 DRICH1Q6PGQ1 229 aaPredicted RBP15.79■□□□□ 0.12
TPM3-208ENST00000341485 CCDC121Q6ZUS5 278 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 RELL1Q8IUW5 271 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 LRRC34Q8IZ02 419 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 SLAIN1Q8ND83 568 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 ARHGEF2Q92974 986 aaKnown RBP15.79■□□□□ 0.12
TPM3-208ENST00000341485 TRIM6Q9C030 488 aaPredicted RBP15.79■□□□□ 0.12
TPM3-208ENST00000341485 TJP2Q9UDY2 1190 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 CYTH4Q9UIA0 394 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 THSD7BQ9C0I4 1608 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 FOXO6A8MYZ6 492 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 INHAP05111 366 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 ZSCAN5DPP0CG00 497 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 GRM5P41594 1212 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 COPS2P61201 443 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 YWHAEP62258 255 aaKnown RBP15.79■□□□□ 0.12
TPM3-208ENST00000341485 LMNB2Q03252 620 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 VSTM1Q6UX27 236 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 TMEM40Q8WWA1 233 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 OSBPL7Q9BZF2 842 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 SDCBP2Q9H190 292 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 ASB7Q9H672 318 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms