RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 CCND3P30281 292 aaPredicted RBP16.27■□□□□ 0.19
MBD1-203ENST00000339998 MIPP30301 263 aa16.27■□□□□ 0.19
MBD1-203ENST00000339998 ATXN1P54253 815 aaKnown RBP16.27■□□□□ 0.19
MBD1-203ENST00000339998 PLCB3Q01970 1234 aa16.27■□□□□ 0.19
MBD1-203ENST00000339998 PIGHQ14442 188 aaPredicted RBP16.27■□□□□ 0.19
MBD1-203ENST00000339998 BEST2Q8NFU1 509 aa16.27■□□□□ 0.19
MBD1-203ENST00000339998 ART4Q93070 314 aa16.27■□□□□ 0.19
MBD1-203ENST00000339998 PRDM4Q9UKN5 801 aa16.27■□□□□ 0.19
MBD1-203ENST00000339998 TIMM13Q9Y5L4 95 aaPredicted RBP16.27■□□□□ 0.19
MBD1-203ENST00000339998 CDKN2BP42772 138 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 IFFO1Q0D2I5 559 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 CLUL1Q15846 466 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 EIF1ADQ8N9N8 165 aaKnown RBP16.26■□□□□ 0.19
MBD1-203ENST00000339998 KBTBD7Q8WVZ9 684 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 RXFP2Q8WXD0 754 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 ATP6V1G3Q96LB4 118 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 CNTN3Q9P232 1028 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 STRIP2Q9ULQ0 834 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 NOVA2Q9UNW9 492 aaKnown RBP16.26■□□□□ 0.19
MBD1-203ENST00000339998 ZNF148Q9UQR1 794 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 hCG_1818297A0A087WSY0 165 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 CAND2O75155 1236 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 IFNB1P01574 187 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 IGHA2P01877 340 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 LCLAT1Q6UWP7 414 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 RNF169Q8NCN4 708 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 ATL2Q8NHH9 583 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 ADAM33Q9BZ11 813 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 C3orf70A6NLC5 250 aaPredicted RBP16.26■□□□□ 0.19
MBD1-203ENST00000339998 PTGESO14684 152 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 HMGCRP04035 888 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 MYZAPP0CAP1 466 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 MAN1A1P33908 653 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 DRG2P55039 364 aaKnown RBP16.26■□□□□ 0.19
MBD1-203ENST00000339998 CALCOCO2Q13137 446 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 FBXO47Q5MNV8 452 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 SYCP2LQ5T4T6 812 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 SCYL2Q6P3W7 929 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 LRRC31Q6UY01 552 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 RCOR2Q8IZ40 523 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 PAAF1Q9BRP4 392 aa16.26■□□□□ 0.19
MBD1-203ENST00000339998 KPNA7A9QM74 516 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 CLDN5O00501 218 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 PDGFRAP16234 1089 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 CRYBB1P53674 252 aaPredicted RBP16.25■□□□□ 0.19
MBD1-203ENST00000339998 HNRNPH2P55795 449 aaKnown RBP16.25■□□□□ 0.19
MBD1-203ENST00000339998 GNGT1P63211 74 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 KYAT1Q16773 422 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 CCDC33Q8N5R6 958 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 EPS8L3Q8TE67 593 aaKnown RBP16.25■□□□□ 0.19
MBD1-203ENST00000339998 SOCS4Q8WXH5 440 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 MCRS1Q96EZ8 462 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 CALN1Q9BXU9 219 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 AGO3Q9H9G7 860 aaKnown RBP16.25■□□□□ 0.19
MBD1-203ENST00000339998 PLEKHA5Q9HAU0 1116 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 MIOSQ9NXC5 875 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 ST3GAL5Q9UNP4 418 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 ZNF236Q9UL36 1845 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 CST8O60676 142 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 CHRNA1P02708 482 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 CYBAP13498 195 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 MLH1P40692 756 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 CACNB2Q08289 660 aaPredicted RBP16.25■□□□□ 0.19
MBD1-203ENST00000339998 CCNG2Q16589 344 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 PAN2Q504Q3 1202 aaKnown RBP16.25■□□□□ 0.19
MBD1-203ENST00000339998 NPNTQ6UXI9 565 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 UBE2Q2Q8WVN8 375 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.25■□□□□ 0.19
MBD1-203ENST00000339998 GAD1Q99259 594 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 NEU2Q9Y3R4 380 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 TLL2Q9Y6L7 1015 aa16.25■□□□□ 0.19
MBD1-203ENST00000339998 LIASO43766 372 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 DUSP11O75319 330 aaKnown RBP16.24■□□□□ 0.19
MBD1-203ENST00000339998 LCP1P13796 627 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 NR1D1P20393 614 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 GDF10P55107 478 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 BYSLQ13895 437 aaKnown RBP16.24■□□□□ 0.19
MBD1-203ENST00000339998 P3H1Q32P28 736 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 TFDP3Q5H9I0 405 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 ZNF365Q70YC5 407 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 OSTM1Q86WC4 334 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 CD302Q8IX05 232 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 PABPC3Q9H361 631 aaKnown RBP16.24■□□□□ 0.19
MBD1-203ENST00000339998 NGRNQ9NPE2 291 aaKnown RBP16.24■□□□□ 0.19
MBD1-203ENST00000339998 USP18Q9UMW8 372 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 UBQLN1Q9UMX0 589 aaKnown RBP16.24■□□□□ 0.19
MBD1-203ENST00000339998 PIRO00625 290 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 PAPSS1O43252 624 aaPredicted RBP16.24■□□□□ 0.19
MBD1-203ENST00000339998 ATF2P15336 505 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 TKTP29401 623 aaKnown RBP16.24■□□□□ 0.19
MBD1-203ENST00000339998 GAD2Q05329 585 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 ZNF268Q14587 947 aaPredicted RBP16.24■□□□□ 0.19
MBD1-203ENST00000339998 KYNUQ16719 465 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 CTU1Q7Z7A3 348 aaKnown RBP16.24■□□□□ 0.19
MBD1-203ENST00000339998 KHSRPQ92945 711 aaKnown RBP eCLIP16.24■□□□□ 0.19
MBD1-203ENST00000339998 RBM41Q96IZ5 413 aaKnown RBP16.24■□□□□ 0.19
MBD1-203ENST00000339998 CAPS2Q9BXY5 557 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 CDC42EP4Q9H3Q1 356 aaKnown RBP16.24■□□□□ 0.19
MBD1-203ENST00000339998 PSD3Q9NYI0 1048 aa16.24■□□□□ 0.19
MBD1-203ENST00000339998 I3L4J1 428 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms