RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 TLE6Q9H808 572 aa20.88■□□□□ 0.93
CDCA4-201ENST00000336219 ATP2A1O14983 1001 aa20.88■□□□□ 0.93
CDCA4-201ENST00000336219 PTPRAP18433 802 aa20.88■□□□□ 0.93
CDCA4-201ENST00000336219 BRD2P25440 801 aaKnown RBP20.88■□□□□ 0.93
CDCA4-201ENST00000336219 MXRA7P84157 204 aa20.88■□□□□ 0.93
CDCA4-201ENST00000336219 SEPT7Q16181 437 aaKnown RBP20.88■□□□□ 0.93
CDCA4-201ENST00000336219 EFHC2Q5JST6 749 aa20.88■□□□□ 0.93
CDCA4-201ENST00000336219 PPP1R15BQ5SWA1 713 aa20.88■□□□□ 0.93
CDCA4-201ENST00000336219 RFX8Q6ZV50 586 aa20.88■□□□□ 0.93
CDCA4-201ENST00000336219 BRSK2Q8IWQ3 736 aa20.88■□□□□ 0.93
CDCA4-201ENST00000336219 C12orf42Q96LP6 360 aa20.88■□□□□ 0.93
CDCA4-201ENST00000336219 PAFAH2Q99487 392 aa20.88■□□□□ 0.93
CDCA4-201ENST00000336219 LNPEPQ9UIQ6 1025 aa20.88■□□□□ 0.93
CDCA4-201ENST00000336219 TCRBV7S3A2A0A539 114 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 ITGAVP06756 1048 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 TNFSF9P41273 254 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 CDKN2BP42772 138 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 CAPSQ13938 189 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 PIGHQ14442 188 aaPredicted RBP20.87■□□□□ 0.93
CDCA4-201ENST00000336219 HIF1AQ16665 826 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 ACSBG2Q5FVE4 666 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 RINLQ6ZS11 566 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 TMEM35BQ8NCS4 154 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 ZNF333Q96JL9 665 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 DCLRE1BQ9H816 532 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 SLC24A2Q9UI40 661 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 SHOC2Q9UQ13 582 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 LRRD1A4D1F6 860 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 ACADSP16219 412 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 SERPINB3P29508 390 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 RFC5P40937 340 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 ERFP50548 548 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 CCDC6Q16204 474 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 TTC7BQ86TV6 843 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 RHPN2Q8IUC4 686 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 WDR49Q8IV35 697 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 PCDH9Q9HC56 1237 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 DDX56Q9NY93 547 aaKnown RBP20.87■□□□□ 0.93
CDCA4-201ENST00000336219 HACL1Q9UJ83 578 aa20.87■□□□□ 0.93
CDCA4-201ENST00000336219 TTLL13PA6NNM8 815 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 NVLO15381 856 aaKnown RBP20.86■□□□□ 0.93
CDCA4-201ENST00000336219 ADCY3O60266 1144 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 ZWINTO95229 277 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 TROVE2P10155 538 aaKnown RBP eCLIP20.86■□□□□ 0.93
CDCA4-201ENST00000336219 ICAM3P32942 547 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 AP3M2P53677 418 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 NRLP54845 237 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 TSNAXIP1Q2TAA8 658 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 ZNF394Q53GI3 561 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 SYCP2LQ5T4T6 812 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 AEBP2Q6ZN18 517 aaPredicted RBP20.86■□□□□ 0.93
CDCA4-201ENST00000336219 C3orf62Q6ZUJ4 267 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 NIPA2Q8N8Q9 360 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 PYROXD1Q8WU10 500 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 WDR60Q8WVS4 1066 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 PTCD3Q96EY7 689 aaKnown RBP20.86■□□□□ 0.93
CDCA4-201ENST00000336219 ZNF518BQ9C0D4 1074 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 MTMR12Q9C0I1 747 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 DLGAP2Q9P1A6 1054 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 LOC285556D6RIA3 1793 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 FAM189A1O60320 539 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 HAUS5O94927 633 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 INHBEP58166 350 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 MYL6P60660 151 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 TAP1Q03518 808 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 STXBP2Q15833 593 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 GPAT2Q6NUI2 795 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 WDTC1Q8N5D0 677 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 FBXO41Q8TF61 875 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 MZB1Q8WU39 189 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 JDP2Q8WYK2 163 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 MANSC1Q9H8J5 431 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 PICK1Q9NRD5 415 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 CISHQ9NSE2 258 aa20.86■□□□□ 0.93
CDCA4-201ENST00000336219 IGKV6D-21A0A0A0MT36 114 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 SIGLEC16A6NMB1 481 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 GSC2O15499 205 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 KLC1Q07866 573 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 FSTL1Q12841 308 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 SMTNL2Q2TAL5 461 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 C11orf91Q3C1V1 193 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 SNX30Q5VWJ9 437 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 DCAF15Q66K64 600 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 ZPBP2Q6X784 338 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 SAMD7Q7Z3H4 446 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 PHC3Q8NDX5 983 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 FBXO36Q8NEA4 188 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 SLC35B2Q8TB61 432 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 BTBD10Q9BSF8 475 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 SAR1AQ9NR31 198 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 ZNF112Q9UJU3 913 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 SMIM24O75264 130 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 CDH5P33151 784 aaPredicted RBP20.85■□□□□ 0.93
CDCA4-201ENST00000336219 MRPS35P82673 323 aaKnown RBP20.85■□□□□ 0.93
CDCA4-201ENST00000336219 TARBP2Q15633 366 aaKnown RBP20.85■□□□□ 0.93
CDCA4-201ENST00000336219 RNF220Q5VTB9 566 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 CPT1BQ92523 772 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 FAM136AQ96C01 138 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 WRNIP1Q96S55 665 aa20.85■□□□□ 0.93
CDCA4-201ENST00000336219 NIF3L1Q9GZT8 377 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms