RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 OR14K1Q8NGZ2 314 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 UBXN6Q9BZV1 441 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 TNKS2Q9H2K2 1166 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 AVENQ9NQS1 362 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 DYRK4Q9NR20 520 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 FAM153AQ9UHL3 310 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 ATP7AQ04656 1500 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 GPC4O75487 556 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SOX30O94993 753 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 FYNP06241 537 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 HNRNPH1P31943 449 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 RXRGP48443 463 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 DNM2P50570 870 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 VLDLRP98155 873 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLC51BQ86UW2 128 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 BHLHE41Q9C0J9 482 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SH3BP4Q9P0V3 963 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 TTC21BQ7Z4L5 1316 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 TRDMT1O14717 391 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 RPS6KA4O75676 772 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 CRTAMO95727 393 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 IARSP41252 1262 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 CENPAP49450 140 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 STXBP2Q15833 593 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 VTCN1Q7Z7D3 282 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 FNIP1Q8TF40 1166 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 EEF1AKMT1Q8WVE0 214 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 PSD2Q9BQI7 771 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 CEP41Q9BYV8 373 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLC12A5Q9H2X9 1139 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 KCNG1Q9UIX4 513 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 E5RI56 91 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 BTN3A1O00481 513 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 CST8O60676 142 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 KATNA1O75449 491 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 KHDRBS3O75525 346 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 MBP02144 154 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 MTHFD1P11586 935 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 ABCE1P61221 599 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 FAM180AQ6UWF9 173 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 OR6Q1Q8NGQ2 317 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 CITED2Q99967 270 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 RPL26L1Q9UNX3 145 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 TEX51A0A1B0GUA7 166 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 NMT2O60551 498 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 VNN2O95498 520 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 GNAI3P08754 354 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 NDUFAF6Q330K2 333 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 GPRC6AQ5T6X5 926 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 HDDC3Q8N4P3 179 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 HIPK2Q9H2X6 1198 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 C1orf112Q9NSG2 853 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZNF224Q9NZL3 707 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SOS1Q07889 1333 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SYNDIG1LA6NDD5 238 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 CCT8L1PA6NM43 557 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 OIP5O43482 229 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 ATE1O95260 518 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 MAPK12P53778 367 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 CCT2P78371 535 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZBED8Q8IZ13 594 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 ADAM32Q8TC27 787 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 GAL3ST3Q96A11 431 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLC29A1Q99808 456 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 VPS25Q9BRG1 176 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 HMG20BQ9P0W2 317 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZFP69BQ9UJL9 534 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 EXOGQ9Y2C4 368 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 KCNH1O95259 989 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 WDPCPO95876 746 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 HNMTP50135 292 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 PPARAQ07869 468 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 ITIH4Q14624 930 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SYT16Q17RD7 645 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 GFOD2Q3B7J2 385 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 MINDY4Q4G0A6 757 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 CDC73Q6P1J9 531 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 RFX6Q8HWS3 928 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 C17orf53Q8N3J3 647 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 FSTL5Q8N475 847 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 CSRNP1Q96S65 589 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 QRSL1Q9H0R6 528 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 NOL11Q9H8H0 719 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 TMEM51Q9NW97 253 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SELENONQ9NZV5 590 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 CLCA2Q9UQC9 943 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 ARHGEF35A5YM69 484 aa6.27□□□□□ -1.4
CDC42BPA-201ENST00000334218 RGL2O15211 777 aa6.27□□□□□ -1.4
CDC42BPA-201ENST00000334218 GADD45BO75293 160 aaPredicted RBP6.27□□□□□ -1.4
CDC42BPA-201ENST00000334218 MATKP42679 507 aa6.27□□□□□ -1.4
CDC42BPA-201ENST00000334218 IL18R1Q13478 541 aa6.27□□□□□ -1.4
CDC42BPA-201ENST00000334218 RAB30Q15771 203 aa6.27□□□□□ -1.4
CDC42BPA-201ENST00000334218 P3H1Q32P28 736 aa6.27□□□□□ -1.4
CDC42BPA-201ENST00000334218 CENPPQ6IPU0 288 aa6.27□□□□□ -1.4
CDC42BPA-201ENST00000334218 ACAD11Q709F0 780 aa6.27□□□□□ -1.4
CDC42BPA-201ENST00000334218 CREB3L2Q70SY1 520 aa6.27□□□□□ -1.4
CDC42BPA-201ENST00000334218 OR8K3Q8NH51 312 aa6.27□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZHX1-C8orf76Q96EF9 292 aa6.27□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms