RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 ZBED8Q8IZ13 594 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 TRIB2Q92519 343 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 IPPQ9Y573 584 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 MAD1L1Q9Y6D9 718 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 STYXL1Q9Y6J8 313 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 IGKV6-21A0A0C4DH24 114 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 RRN3P2A6NIE6 340 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 KPNA7A9QM74 516 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 MOCS2O96007 188 aaPredicted RBP9.49□□□□□ -0.89
COPB2-201ENST00000333188 ZBTB48P10074 688 aaPredicted RBP9.49□□□□□ -0.89
COPB2-201ENST00000333188 AKR1A1P14550 325 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 KRT15P19012 456 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 CTGFP29279 349 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 BRCC3P46736 316 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 SOX4Q06945 474 aaPredicted RBP9.49□□□□□ -0.89
COPB2-201ENST00000333188 TMED2Q15363 201 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 MDH1BQ5I0G3 518 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 CDCA2Q69YH5 1023 aaPredicted RBP9.49□□□□□ -0.89
COPB2-201ENST00000333188 FAM183BPQ6ZVS7 135 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 ARRDC4Q8NCT1 418 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 SPATA18Q8TC71 538 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 FAM172AQ8WUF8 416 aa9.49□□□□□ -0.89
COPB2-201ENST00000333188 ALG13Q9NP73 1137 aaKnown RBP9.49□□□□□ -0.89
COPB2-201ENST00000333188 BARX2Q9UMQ3 279 aaPredicted RBP9.49□□□□□ -0.89
COPB2-201ENST00000333188 ATAD5Q96QE3 1844 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 NT5C1B-RDH14C9J2C7 533 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 SPTLC1O15269 473 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 B4GALT4O60513 344 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 SPAG7O75391 227 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 TJP3O95049 919 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 SLC8A3P57103 927 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 GAD2Q05329 585 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 KCNA10Q16322 511 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 GDF6Q6KF10 455 aaPredicted RBP9.48□□□□□ -0.89
COPB2-201ENST00000333188 CPLX4Q7Z7G2 160 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 SRRM1Q8IYB3 904 aaKnown RBP9.48□□□□□ -0.89
COPB2-201ENST00000333188 SIX6OS1Q8N1H7 587 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 WNT8BQ93098 351 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.48□□□□□ -0.89
COPB2-201ENST00000333188 E2F8A0AVK6 867 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 ITGBL1O95965 494 aaPredicted RBP9.48□□□□□ -0.89
COPB2-201ENST00000333188 CYP1A1P04798 512 aaPredicted RBP9.48□□□□□ -0.89
COPB2-201ENST00000333188 OR4Q2P0C623 313 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 RBP3P10745 1247 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 AP3M2P53677 418 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 PTGISQ16647 500 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 TRIM72Q6ZMU5 477 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 CD99L2Q8TCZ2 262 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 B3GALT6Q96L58 329 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 AGAP3Q96P47 875 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 KCNK16Q96T55 309 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 ADAM2Q99965 735 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 USP18Q9UMW8 372 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 UNC80Q8N2C7 3258 aa9.48□□□□□ -0.89
COPB2-201ENST00000333188 RASGRF2O14827 1237 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 MEFVO15553 781 aaPredicted RBP9.47□□□□□ -0.89
COPB2-201ENST00000333188 SRGAP2BP0DMP2 458 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 DESP17661 470 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 FCGRTP55899 365 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 ADIGQ0VDE8 80 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 SEPT7Q16181 437 aaKnown RBP9.47□□□□□ -0.89
COPB2-201ENST00000333188 TMC3Q7Z5M5 1100 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 RSPH3Q86UC2 560 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 ZNF677Q86XU0 584 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 ATL2Q8NHH9 583 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 DDX27Q96GQ7 796 aaKnown RBP9.47□□□□□ -0.89
COPB2-201ENST00000333188 CALR3Q96L12 384 aaKnown RBP9.47□□□□□ -0.89
COPB2-201ENST00000333188 FAM81BQ96LP2 452 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 TRPV6Q9H1D0 765 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 PTPRHQ9HD43 1115 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 TMEM191CA6NGB0 347 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 A6NJR5 290 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 BTNL10A8MVZ5 291 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 C2CD2LO14523 706 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 ABLIM1O14639 778 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 LRCH4O75427 683 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 PIGRP01833 764 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 MYBL1P10243 752 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 GNAT1P11488 350 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 CLCNKBP51801 687 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 EIF3EP60228 445 aaKnown RBP9.47□□□□□ -0.89
COPB2-201ENST00000333188 YWHAGP61981 247 aaKnown RBP eCLIP9.47□□□□□ -0.89
COPB2-201ENST00000333188 ZNF844Q08AG5 666 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 PDIA2Q13087 525 aaKnown RBP9.47□□□□□ -0.89
COPB2-201ENST00000333188 SPOCD1Q6ZMY3 1216 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 CCDC13Q8IYE1 715 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 ADGRF2Q8IZF7 708 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 PYROXD2Q8N2H3 581 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 RBM15Q96T37 977 aaKnown RBP eCLIP9.47□□□□□ -0.896e-6■■■■□ 19.9
COPB2-201ENST00000333188 AGO3Q9H9G7 860 aaKnown RBP9.47□□□□□ -0.89
COPB2-201ENST00000333188 H0YHG0 523 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 FAM189A1O60320 539 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 CILPO75339 1184 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 ZNF865P0CJ78 1059 aaPredicted RBP9.47□□□□□ -0.89
COPB2-201ENST00000333188 CREB1P16220 341 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 IRX4P78413 519 aa9.47□□□□□ -0.89
COPB2-201ENST00000333188 C1QBPQ07021 282 aaKnown RBP9.47□□□□□ -0.89
COPB2-201ENST00000333188 FASTKD3Q14CZ7 662 aaKnown RBP9.47□□□□□ -0.89
COPB2-201ENST00000333188 APBB1IPQ7Z5R6 666 aaPredicted RBP9.47□□□□□ -0.89
COPB2-201ENST00000333188 GTF3C2Q8WUA4 911 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms