RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 TFDP3Q5H9I0 405 aa16.77■□□□□ 0.28
SYNM-201ENST00000328642 HIPK4Q8NE63 616 aa16.77■□□□□ 0.28
SYNM-201ENST00000328642 FBXO41Q8TF61 875 aa16.77■□□□□ 0.28
SYNM-201ENST00000328642 MFSD14AQ96MC6 490 aa16.77■□□□□ 0.28
SYNM-201ENST00000328642 ZFP42Q96MM3 310 aa16.77■□□□□ 0.28
SYNM-201ENST00000328642 USP50Q70EL3 339 aaPredicted RBP16.77■□□□□ 0.27
SYNM-201ENST00000328642 SDCCAG8Q86SQ7 713 aaPredicted RBP16.77■□□□□ 0.27
SYNM-201ENST00000328642 CCHCR1Q8TD31 782 aa16.77■□□□□ 0.27
SYNM-201ENST00000328642 HES6Q96HZ4 224 aa16.77■□□□□ 0.27
SYNM-201ENST00000328642 CHRNB2P17787 502 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 SPARCL1Q14515 664 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 ARL13BQ3SXY8 428 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 FBXO47Q5MNV8 452 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 MROH9Q5TGP6 573 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 XPO6Q96QU8 1125 aaKnown RBP16.76■□□□□ 0.27
SYNM-201ENST00000328642 PPP1R12CQ9BZL4 782 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 ZC3H7BQ9UGR2 993 aaKnown RBP16.76■□□□□ 0.27
SYNM-201ENST00000328642 KCNK1O00180 336 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 NOMO3P69849 1222 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 TSPY1Q01534 308 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 MIB1Q86YT6 1006 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 CLDN5O00501 218 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 NRLP54845 237 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 JAM2P57087 298 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 PCSK7Q16549 785 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 TRIM68Q6AZZ1 485 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 LRRC34Q8IZ02 419 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 KIF2BQ8N4N8 673 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 ATP11CQ8NB49 1132 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 EPN3Q9H201 632 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 WDR35Q9P2L0 1181 aa16.76■□□□□ 0.27
SYNM-201ENST00000328642 MYH15Q9Y2K3 1946 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 GAS2O43903 313 aaKnown RBP16.75■□□□□ 0.27
SYNM-201ENST00000328642 VDRP11473 427 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 PECAM1P16284 738 aaPredicted RBP16.75■□□□□ 0.27
SYNM-201ENST00000328642 TPI1P60174 286 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 BTBD8Q5XKL5 378 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 TFAP2BQ92481 460 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 DCLK3Q9C098 648 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 NMRK2Q9NPI5 230 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 GDF3Q9NR23 364 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 UBQLN1Q9UMX0 589 aaKnown RBP16.75■□□□□ 0.27
SYNM-201ENST00000328642 CHD4Q14839 1912 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 MYPNQ86TC9 1320 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 RRN3P2A6NIE6 340 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 DCDC2CA8MYV0 355 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 CDH16O75309 829 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 TRPA1O75762 1119 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 EPHB2P29323 1055 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 CHKAP35790 457 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 CES3Q6UWW8 571 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 IFT122Q9HBG6 1241 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 GPBP1L1Q9HC44 474 aaPredicted RBP16.75■□□□□ 0.27
SYNM-201ENST00000328642 LCMT1Q9UIC8 334 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 NFASCO94856 1347 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 USP12O75317 370 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 BAG2O95816 211 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 EIF4BP23588 611 aaKnown RBP16.75■□□□□ 0.27
SYNM-201ENST00000328642 MFSD10Q14728 455 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 NAA25Q14CX7 972 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 TAF5Q15542 800 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 LRRC57Q8N9N7 239 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 PPP4R1Q8TF05 950 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 STMN2Q93045 179 aa16.75■□□□□ 0.27
SYNM-201ENST00000328642 ASS1P00966 412 aaKnown RBP16.74■□□□□ 0.27
SYNM-201ENST00000328642 SLC26A2P50443 739 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 ADIGQ0VDE8 80 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 SRLQ86TD4 932 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 ADGRF2Q8IZF7 708 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 CELF6Q96J87 481 aaKnown RBP16.74■□□□□ 0.27
SYNM-201ENST00000328642 UNKQ9C0B0 810 aaKnown RBP16.74■□□□□ 0.27
SYNM-201ENST00000328642 TMBIM4Q9HC24 238 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 TREHO43280 583 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 LPXNO60711 386 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 C4BPAP04003 597 aaKnown RBP16.74■□□□□ 0.27
SYNM-201ENST00000328642 AMPD1P23109 780 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 FNTAP49354 379 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 PTGISQ16647 500 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 PABPC5Q96DU9 382 aaKnown RBP16.74■□□□□ 0.27
SYNM-201ENST00000328642 BARX2Q9UMQ3 279 aaPredicted RBP16.74■□□□□ 0.27
SYNM-201ENST00000328642 PTPRJQ12913 1337 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 STRNO43815 780 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 KRT37O76014 449 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 TCF4P15884 667 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 PPM1FP49593 454 aaPredicted RBP16.74■□□□□ 0.27
SYNM-201ENST00000328642 CPT1AP50416 773 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 DENND5BQ6ZUT9 1274 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 THEM5Q8N1Q8 247 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 FBXO36Q8NEA4 188 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 FAM136AQ96C01 138 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 CPXM1Q96SM3 734 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 TUBGCP4Q9UGJ1 667 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 SMCHD1A6NHR9 2005 aa16.74■□□□□ 0.27
SYNM-201ENST00000328642 TADA2AO75478 443 aa16.73■□□□□ 0.27
SYNM-201ENST00000328642 ATP4AP20648 1035 aa16.73■□□□□ 0.27
SYNM-201ENST00000328642 TAP1Q03518 808 aa16.73■□□□□ 0.27
SYNM-201ENST00000328642 BMPR2Q13873 1038 aa16.73■□□□□ 0.27
SYNM-201ENST00000328642 PTPN20Q4JDL3 420 aa16.73■□□□□ 0.27
SYNM-201ENST00000328642 TADA2BQ86TJ2 420 aa16.73■□□□□ 0.27
SYNM-201ENST00000328642 CCDC117Q8IWD4 279 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms