RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 ARFGEF1Q9Y6D6 1849 aa11.02□□□□□ -0.65
COL3A1-202ENST00000317840 CNTNAP1P78357 1384 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 CIB2O75838 187 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 PTPN4P29074 926 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 STAT5BP51692 787 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 KDSRQ06136 332 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 DUOXA2Q1HG44 320 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 WDR72Q3MJ13 1102 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 LGSNQ5TDP6 509 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 C1orf228Q6PIY5 440 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 SPATA33Q96N06 139 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 LRMDAQ9H2I8 198 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 FBXO6Q9NRD1 293 aaPredicted RBP11.01□□□□□ -0.65
COL3A1-202ENST00000317840 CYP39A1Q9NYL5 469 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 ARMCX1Q9P291 453 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 SLC17A7Q9P2U7 560 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 ARHGAP42A6NI28 874 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 ALOX15BO15296 676 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 C4BPAP04003 597 aaKnown RBP11.01□□□□□ -0.65
COL3A1-202ENST00000317840 TXNP10599 105 aaKnown RBP11.01□□□□□ -0.65
COL3A1-202ENST00000317840 KLRC2P26717 231 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 RFC1P35251 1148 aaPredicted RBP11.01□□□□□ -0.65
COL3A1-202ENST00000317840 CDH6P55285 790 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 LY6KQ17RY6 165 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 TREML2Q5T2D2 321 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 FAM160B1Q5W0V3 765 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 VSIG10LQ86VR7 867 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 PHF13Q86YI8 300 aaPredicted RBP11.01□□□□□ -0.65
COL3A1-202ENST00000317840 FBXL18Q96ME1 805 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 MMP19Q99542 508 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 NGRNQ9NPE2 291 aaKnown RBP11.01□□□□□ -0.65
COL3A1-202ENST00000317840 RAB6BQ9NRW1 208 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 PRKAG3Q9UGI9 489 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 ZMYND8Q9ULU4 1186 aaPredicted RBP11.01□□□□□ -0.65
COL3A1-202ENST00000317840 TELO2Q9Y4R8 837 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 TMEM191CA6NGB0 347 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 NVLO15381 856 aaKnown RBP11.01□□□□□ -0.65
COL3A1-202ENST00000317840 GRAP2O75791 330 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 SKIP12755 728 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 BGNP21810 368 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 MMP8P22894 467 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 PTDSS1P48651 473 aaKnown RBP11.01□□□□□ -0.65
COL3A1-202ENST00000317840 WNT7BP56706 349 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 FAM47CQ5HY64 1035 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 ANKRD22Q5VYY1 191 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 TLDC1Q6P9B6 456 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 SESTD1Q86VW0 696 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 ZBTB8OSQ8IWT0 167 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 GPRASP2Q96D09 838 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 PTPRJQ12913 1337 aa11.01□□□□□ -0.65
COL3A1-202ENST00000317840 hCG_1818297A0A087WSY0 165 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 C2orf71A6NGG8 1288 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 F5H423 210 aaPredicted RBP11□□□□□ -0.65
COL3A1-202ENST00000317840 CAPN9O14815 690 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 CST3P01034 146 aaPredicted RBP11□□□□□ -0.65
COL3A1-202ENST00000317840 ENO1P06733 434 aaKnown RBP11□□□□□ -0.65
COL3A1-202ENST00000317840 NRLP54845 237 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 KLC1Q07866 573 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 TMEM62Q0P6H9 643 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 ACVR2BQ13705 512 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 TMEM63BQ5T3F8 832 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 GPC2Q8N158 579 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 RNF149Q8NC42 400 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 ASAP3Q8TDY4 903 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 CGRRF1Q99675 332 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 NIF3L1Q9GZT8 377 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 DENND2DQ9H6A0 471 aaPredicted RBP11□□□□□ -0.65
COL3A1-202ENST00000317840 ADARB2Q9NS39 739 aaKnown RBP11□□□□□ -0.65
COL3A1-202ENST00000317840 DLGAP2Q9P1A6 1054 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 ZFATQ9P243 1243 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 STRIP2Q9ULQ0 834 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 APRTP07741 180 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 MYL2P10916 166 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 PYGBP11216 843 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 DESP17661 470 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 EPHX2P34913 555 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 PGM1P36871 562 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 TNFSF9P41273 254 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 ZNF200P98182 395 aaPredicted RBP11□□□□□ -0.65
COL3A1-202ENST00000317840 PTP4A2Q12974 167 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 MAPK6Q16659 721 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 PPP6R3Q5H9R7 873 aaPredicted RBP11□□□□□ -0.65
COL3A1-202ENST00000317840 GJC2Q5T442 439 aaPredicted RBP11□□□□□ -0.65
COL3A1-202ENST00000317840 FAM102AQ5T9C2 384 aaPredicted RBP11□□□□□ -0.65
COL3A1-202ENST00000317840 TMEM154Q6P9G4 183 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 FBXO16Q8IX29 292 aaPredicted RBP11□□□□□ -0.65
COL3A1-202ENST00000317840 SMC1BQ8NDV3 1235 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 RDM1Q8NG50 284 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 RFWD2Q8NHY2 731 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 INPP5DQ92835 1189 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 TTC1Q99614 292 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 NTPCRQ9BSD7 190 aaKnown RBP11□□□□□ -0.65
COL3A1-202ENST00000317840 DCLRE1BQ9H816 532 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 SLC5A4Q9NY91 659 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 C10orf71Q711Q0 1435 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 H3BRJ5 948 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 TBC1D12O60347 775 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 KRT37O76014 449 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 VNN1O95497 513 aa11□□□□□ -0.65
COL3A1-202ENST00000317840 CCNB1P14635 433 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms