RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 TEX33O43247 280 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 CLPTM1O96005 669 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 RALAP11233 206 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 RECQLP46063 649 aaPredicted RBP9.16□□□□□ -0.94
COL6A5-202ENST00000312481 SLC29A2Q14542 456 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 ERMARDQ5T6L9 678 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 METTL21CQ5VZV1 264 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 RAD9BQ6WBX8 426 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 RHPN2Q8IUC4 686 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 ANKRD13AQ8IZ07 590 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 KYQ8NBH2 561 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 AKT3Q9Y243 479 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 ALOX5P09917 674 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 C3orf62Q6ZUJ4 267 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 CABLES1Q8TDN4 633 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 LRRC19Q9H756 370 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 PRR12Q9ULL5 1215 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 PCDHA3Q9Y5H8 950 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 ALBP02768 609 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 FECHP22830 423 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 PRDX6P30041 224 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 PEX3P56589 373 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 SLC34A1Q06495 639 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 LRRC74AQ0VAA2 488 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 QRICH1Q2TAL8 776 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 IKBIPQ70UQ0 350 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 VPS50Q96JG6 964 aa9.16□□□□□ -0.94
COL6A5-202ENST00000312481 H0Y3Z8 333 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 ANXA6P08133 673 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 EIF4BP23588 611 aaKnown RBP9.15□□□□□ -0.94
COL6A5-202ENST00000312481 PRAMEP78395 509 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 SLC20A1Q8WUM9 679 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 APOPT1Q96IL0 206 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 OSBPL6Q9BZF3 934 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 SEC31BQ9NQW1 1179 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 POLG2Q9UHN1 485 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 RREB1Q92766 1687 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 CTDNEP1O95476 244 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 HMOX2P30519 316 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 SEL1L3Q68CR1 1132 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.15□□□□□ -0.94
COL6A5-202ENST00000312481 AGPAT3Q9NRZ7 376 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 SCN9AQ15858 1988 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 IRGMA1A4Y4 181 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 DAB1O75553 588 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 CPA3P15088 417 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 PON1P27169 355 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 TRPC1P48995 793 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 FMR1Q06787 632 aaKnown RBP eCLIP9.15□□□□□ -0.94
COL6A5-202ENST00000312481 TMEM119Q4V9L6 283 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 RDH13Q8NBN7 331 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 AGBL3Q8NEM8 1001 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 ZNF507Q8TCN5 953 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 LRRC40Q9H9A6 602 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 DMAP1Q9NPF5 467 aaPredicted RBP9.15□□□□□ -0.94
COL6A5-202ENST00000312481 ITGA11Q9UKX5 1188 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 DNPEPQ9ULA0 475 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 TBX20Q9UMR3 447 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 FAM32AQ9Y421 112 aaKnown RBP9.15□□□□□ -0.94
COL6A5-202ENST00000312481 WDR81Q562E7 1941 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 EVPLLA8MZ36 301 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 FGRP09769 529 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 XPAP23025 273 aaPredicted RBP9.15□□□□□ -0.94
COL6A5-202ENST00000312481 VCPP55072 806 aaKnown RBP9.15□□□□□ -0.94
COL6A5-202ENST00000312481 KRT72Q14CN4 511 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 SESN1Q9Y6P5 492 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 ZNF335Q9H4Z2 1342 aaPredicted RBP9.15□□□□□ -0.94
COL6A5-202ENST00000312481 POTEMA6NI47 508 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 SOAT2O75908 522 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 CYP11B2P19099 503 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 CSNK2BP67870 215 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 RASA2Q15283 850 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 WDR49Q8IV35 697 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 TFB1MQ8WVM0 346 aaKnown RBP9.15□□□□□ -0.94
COL6A5-202ENST00000312481 FTOQ9C0B1 505 aaKnown RBP eCLIP9.15□□□□□ -0.94
COL6A5-202ENST00000312481 SEPT10Q9P0V9 454 aa9.15□□□□□ -0.94
COL6A5-202ENST00000312481 CDV3Q9UKY7 258 aaKnown RBP9.15□□□□□ -0.94
COL6A5-202ENST00000312481 HMGCRP04035 888 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 DCTN2Q13561 401 aaKnown RBP9.15□□□□□ -0.95
COL6A5-202ENST00000312481 SPANXN3Q5MJ09 141 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 FAM102AQ5T9C2 384 aaPredicted RBP9.15□□□□□ -0.95
COL6A5-202ENST00000312481 TTC23LQ6PF05 361 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 C8orf37Q96NL8 207 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 SLC39A8Q9C0K1 460 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 DNAAF2Q9NVR5 837 aaKnown RBP9.15□□□□□ -0.95
COL6A5-202ENST00000312481 F5H6K3 240 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 RARBP10826 455 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 KLRC3Q07444 240 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 MRPL28Q13084 256 aaKnown RBP9.15□□□□□ -0.95
COL6A5-202ENST00000312481 DPYSQ14117 519 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 PDE1CQ14123 709 aaPredicted RBP9.15□□□□□ -0.95
COL6A5-202ENST00000312481 INAQ16352 499 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 BBS7Q8IWZ6 715 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 GRAMD1CQ8IYS0 662 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 VPS33AQ96AX1 596 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 SYTL2Q9HCH5 934 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 C4AP0C0L4 1744 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 C4BP0C0L5 1744 aa9.15□□□□□ -0.95
COL6A5-202ENST00000312481 ANP32DO95626 131 aa9.14□□□□□ -0.95
COL6A5-202ENST00000312481 AXLP30530 894 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms