RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 PDGFCQ9NRA1 345 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 H2AFY2Q9P0M6 372 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 BRPF3Q9ULD4 1205 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 RIC1Q4ADV7 1423 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ADAMTS13Q76LX8 1427 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 O00370 1275 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 EEF2KO00418 725 aaKnown RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 PRPF4O43172 522 aaKnown RBP eCLIP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 VDRP11473 427 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 BRD2P25440 801 aaKnown RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 HTR7P34969 479 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 GTF2A1P52655 376 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 PLOD1Q02809 727 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 RBL2Q08999 1139 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 LYPLAL1Q5VWZ2 237 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 NUGGCQ68CJ6 796 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 MPZL3Q6UWV2 235 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 SZRD1Q7Z422 152 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 AGPAT1Q99943 283 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ROPN1BQ9BZX4 212 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ROPN1Q9HAT0 212 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 NAGPAQ9UK23 515 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 MYH14Q7Z406 1995 aaKnown RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 FRMPD4Q14CM0 1322 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF609O15014 1411 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 POTEFA5A3E0 1075 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 E9PMD0 336 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 STX7O15400 261 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 OPHN1O60890 802 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 KLHL2O95198 593 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 EIF2S1P05198 315 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 POTEIP0CG38 1075 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CPA1P15085 419 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 KLRC2P26717 231 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 DSG3P32926 999 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 EIF4A3P38919 411 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 NPTX2P47972 431 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 PPIGQ13427 754 aaKnown RBP eCLIP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 POTEGQ6S5H5 508 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 POTEEQ6S8J3 1075 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CLEC17AQ6ZS10 378 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 TRIM69Q86WT6 500 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SFR1Q86XK3 245 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 TAGAPQ8N103 731 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ARMC2Q8NEN0 867 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 TFB1MQ8WVM0 346 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 RMND5BQ96G75 393 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 PHF20Q9BVI0 1012 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 MRPL1Q9BYD6 325 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 RNF208Q9H0X6 261 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 KLHL28Q9NXS3 571 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 FBXL21Q9UKT6 434 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CNTNAP2Q9UHC6 1331 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 POTEMA6NI47 508 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 PIK3CDO00329 1044 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 PRKAB2O43741 272 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 HMGCRP04035 888 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ERBB2P04626 1255 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 MMEP08473 750 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CASP2P42575 452 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 THOP1P52888 689 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CAMK2GQ13555 558 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 FAM110CQ1W6H9 321 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 FIGNQ5HY92 759 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 PTF1AQ7RTS3 328 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SLC22A9Q8IVM8 553 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 GLYCTKQ8IVS8 523 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SPACA7Q96KW9 195 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 GPR101Q96P66 508 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SEPT5Q99719 369 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ANTXR1Q9H6X2 564 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 COPS7BQ9H9Q2 264 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SPAG17Q6Q759 2223 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 MST1RQ04912 1400 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 POTECB2RU33 542 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SMIM22K7EJ46 135 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 DFFAO00273 331 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 GYG2O15488 501 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 FGF10O15520 208 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 MED24O75448 989 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 PTGER2P43116 358 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 EIF3EP60228 445 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 DYNLT1P63172 113 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 KRT31Q15323 416 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 C10orf120Q5SQS8 335 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 C11orf88Q6PI97 169 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 USP45Q70EL2 814 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SLFN11Q7Z7L1 901 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 RNF168Q8IYW5 571 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 RASGRP4Q8TDF6 673 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 TMC2Q8TDI7 906 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 DMAP1Q9NPF5 467 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 TBC1D13Q9NVG8 400 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 DPP3Q9NY33 737 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 MAD2L2Q9UI95 211 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SOX13Q9UN79 622 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SEC16AO15027 2179 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 TK2O00142 265 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 WNT10BO00744 389 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 SYF2O95926 243 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms