RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 NR2E3Q9Y5X4 410 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 E7EVH7 732 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 SUPT3HO75486 399 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 PROSCO94903 275 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 ADRB2P07550 413 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 FLT3LGP49771 235 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 PTP4A2Q12974 167 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 CCDC6Q16204 474 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 SPOUT1Q5T280 376 aaKnown RBP6.29□□□□□ -1.4
SEC22A-201ENST00000309934 RFX6Q8HWS3 928 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 LRRC43Q8N309 656 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 DRAXINQ8NBI3 349 aaPredicted RBP6.29□□□□□ -1.4
SEC22A-201ENST00000309934 RNF169Q8NCN4 708 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 IFT81Q8WYA0 676 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 ZSWIM1Q9BR11 485 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 C11orf70Q9BRQ4 267 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 MTMR12Q9C0I1 747 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 TXNRD2Q9NNW7 524 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 EFR3BQ9Y2G0 817 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 SNX9Q9Y5X1 595 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 RBBP6Q7Z6E9 1792 aaKnown RBP6.29□□□□□ -1.4
SEC22A-201ENST00000309934 A0A087X0T9 212 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 LACTBL1A8MY62 500 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 PFDN6O15212 129 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 FAM228BP0C875 321 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 FAM200BP0CF97 657 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 GPD1P21695 349 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 NFKBIAP25963 317 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 HTR7P34969 479 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 TMED10P49755 219 aaKnown RBP6.29□□□□□ -1.4
SEC22A-201ENST00000309934 RPL10AP62906 217 aaKnown RBP6.29□□□□□ -1.4
SEC22A-201ENST00000309934 CLDN10P78369 228 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 SKOR1P84550 965 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 PPP3CAQ08209 521 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 EFHC2Q5JST6 749 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 THEMIS2Q5TEJ8 643 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 KLHL7Q8IXQ5 586 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 MCOLN2Q8IZK6 566 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 FBF1Q8TES7 1133 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 FNIP1Q8TF40 1166 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 KRT35Q92764 455 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 UPF3AQ9H1J1 476 aaKnown RBP6.29□□□□□ -1.4
SEC22A-201ENST00000309934 COMMD8Q9NX08 183 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 FAF1Q9UNN5 650 aaPredicted RBP6.29□□□□□ -1.4
SEC22A-201ENST00000309934 RAD54BQ9Y620 910 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 FAM169AQ9Y6X4 670 aa6.29□□□□□ -1.4
SEC22A-201ENST00000309934 ADAMTS3O15072 1205 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 HEXIM1O94992 359 aaKnown RBP6.28□□□□□ -1.4
SEC22A-201ENST00000309934 FTCDO95954 541 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 VTNP04004 478 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 TNFRSF8P28908 595 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 GJC1P36383 396 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 PCYT1AP49585 367 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 CRHR2Q13324 411 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 VEPH1Q14D04 833 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 KIAA1841Q6NSI8 718 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 SCARA5Q6ZMJ2 495 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 IRF2BP2Q7Z5L9 587 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 POLNQ7Z5Q5 900 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 PHLDB2Q86SQ0 1253 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 SPATA2LQ8IUW3 424 aaPredicted RBP6.28□□□□□ -1.4
SEC22A-201ENST00000309934 ELMOD1Q8N336 334 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 DNAJB3Q8WWF6 145 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 CFAP57Q96MR6 1250 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 PURBQ96QR8 312 aaKnown RBP6.28□□□□□ -1.4
SEC22A-201ENST00000309934 CENPOQ9BU64 300 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 AASDHPPTQ9NRN7 309 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 OLA1Q9NTK5 396 aaKnown RBP6.28□□□□□ -1.4
SEC22A-201ENST00000309934 CDH9Q9ULB4 789 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 ATAD5Q96QE3 1844 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 TSPAN1O60635 241 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 SPAG6O75602 509 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 SNAI1O95863 264 aaPredicted RBP6.28□□□□□ -1.4
SEC22A-201ENST00000309934 FGGP02679 453 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 KRT10P13645 584 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 PRKAR2AP13861 404 aaKnown RBP6.28□□□□□ -1.4
SEC22A-201ENST00000309934 ITIH2P19823 946 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 MX2P20592 715 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 ALDH3A1P30838 453 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 ADCY8P40145 1251 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 DGKZQ13574 1117 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 KIZQ2M2Z5 673 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 CBWD6Q4V339 395 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 CBWD3Q5JTY5 395 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 CBWD5Q5RIA9 395 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 ITPRIPL1Q6GPH6 555 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 LRIG3Q6UXM1 1119 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 TMEM139Q8IV31 216 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 PSTKQ8IV42 348 aaKnown RBP6.28□□□□□ -1.4
SEC22A-201ENST00000309934 KSR1Q8IVT5 923 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 SPATA4Q8NEY3 305 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 EPS8L1Q8TE68 723 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 BORCS6Q96GS4 357 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 RNPC3Q96LT9 517 aaKnown RBP6.28□□□□□ -1.4
SEC22A-201ENST00000309934 CNPY3Q9BT09 278 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 YIPF2Q9BWQ6 316 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 ELOVL4Q9GZR5 314 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 PDZD7Q9H5P4 517 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 ZWILCHQ9H900 591 aa6.28□□□□□ -1.4
SEC22A-201ENST00000309934 CNOT10Q9H9A5 744 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms