RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 S1PR5Q9H228 398 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 PIDD1Q9HB75 910 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 CSNK1G1Q9HCP0 422 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 AVENQ9NQS1 362 aaPredicted RBP18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 KRT82Q9NSB4 513 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 COMMD8Q9NX08 183 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 UXTQ9UBK9 157 aaPredicted RBP18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 ATG2AQ2TAZ0 1938 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 A0A1W2PQJ5 194 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 FOXN3O00409 490 aaPredicted RBP18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 RFPL2O75678 378 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 AP1G2O75843 785 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 TPM1P09493 284 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 SETSIPP0DME0 302 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 CCDC130P13994 396 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 NPR3P17342 541 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 PTPN2P17706 415 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 GNA15P30679 374 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 PBX1P40424 430 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 JAM2P57087 298 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 RBM10P98175 930 aaKnown RBP18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 PLCB2Q00722 1185 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 APBA1Q02410 837 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 DLX2Q07687 328 aaPredicted RBP18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 RARS2Q5T160 578 aaKnown RBP18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 LCLAT1Q6UWP7 414 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 GAS2L3Q86XJ1 694 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 ANKRD52Q8NB46 1076 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 ATXN2LQ8WWM7 1075 aaKnown RBP18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 DUSP16Q9BY84 665 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 UBXN6Q9BZV1 441 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 TRIM5Q9C035 493 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 ZNF518BQ9C0D4 1074 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 FAM49BQ9NUQ9 324 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 ZMYM5Q9UJ78 669 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 SLC27A5Q9Y2P5 690 aa18.97■□□□□ 0.63
SSSCA1-201ENST00000309328 EYSQ5T1H1 3165 aa18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 O00370 1275 aa18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 ZNF197O14709 1029 aa18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 SOX5P35711 763 aa18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 KLK7P49862 253 aa18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 PDE6CP51160 858 aa18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 ORC1Q13415 861 aa18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 PPP1R26Q5T8A7 1209 aaPredicted RBP18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 SPECC1LQ69YQ0 1117 aa18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 TMC5Q6UXY8 1006 aa18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 ZNF677Q86XU0 584 aa18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 SCN4BQ8IWT1 228 aa18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 ZNF707Q96C28 371 aaPredicted RBP18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 CRISPLD1Q9H336 500 aa18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 ASAH2Q9NR71 780 aa18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 CEP83Q9Y592 693 aa18.96■□□□□ 0.63
SSSCA1-201ENST00000309328 F8VP50 259 aa18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 RNF225M0QZC1 329 aaPredicted RBP18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 CCL16O15467 120 aa18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 MICAL2O94851 1124 aa18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 RTN3O95197 1032 aaPredicted RBP18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 ADORA2BP29275 332 aa18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 EPHA5P54756 1037 aa18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 BST2Q10589 180 aaKnown RBP18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 CYP4A22Q5TCH4 519 aa18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 DENND5BQ6ZUT9 1274 aa18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 PAQR9Q6ZVX9 377 aa18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 SUSD6Q92537 303 aa18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 TRMT2BQ96GJ1 504 aaKnown RBP18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 GPR88Q9GZN0 384 aa18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 FBXO44Q9H4M3 255 aa18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 WDR6Q9NNW5 1121 aaKnown RBP18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 NLRC4Q9NPP4 1024 aa18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 TSPAN16Q9UKR8 245 aa18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 REV3LO60673 3130 aa18.95■□□□□ 0.62
SSSCA1-201ENST00000309328 H3BQ06 376 aaPredicted RBP18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 CLDN5O00501 218 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 EPHB6O15197 1021 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 CYP26A1O43174 497 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 FERP16591 822 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 ATF6P18850 670 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 PPP3CCP48454 512 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 SNX16P57768 344 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 CBX2Q14781 532 aaPredicted RBP18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 CCDC142Q17RM4 750 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 PABPC1LQ4VXU2 614 aaKnown RBP18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 CLEC20AQ6ZU45 233 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 DNAJB7Q7Z6W7 309 aaPredicted RBP18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 NUP93Q8N1F7 819 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 TTC9BQ8N6N2 239 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 C12orf76Q8N812 135 aaPredicted RBP18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 ZNF606Q8WXB4 792 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 SYN2Q92777 582 aaPredicted RBP18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 MRFAP1L1Q96HT8 127 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 MYRFLQ96LU7 910 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 GCNAQ96QF7 691 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 TTYH3Q9C0H2 523 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 AJAP1Q9UKB5 411 aaPredicted RBP18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 PCDHGC3Q9UN70 934 aa18.94■□□□□ 0.62
SSSCA1-201ENST00000309328 XIRP2A4UGR9 3374 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 PRUNE2Q8WUY3 3088 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 COL6A3P12111 3177 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 SOBPA7XYQ1 873 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms