RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 ZFATQ9P243 1243 aa14.2□□□□□ -0.14
CTTN-201ENST00000301843 SMG5Q9UPR3 1016 aaKnown RBP14.2□□□□□ -0.14
CTTN-201ENST00000301843 NR2E3Q9Y5X4 410 aa14.2□□□□□ -0.14
CTTN-201ENST00000301843 GYG2O15488 501 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 LPXNO60711 386 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 HAUS5O94927 633 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 RFC5P40937 340 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 CCDC15Q0P6D6 951 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 CTC1Q2NKJ3 1217 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 VSIG10LQ86VR7 867 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 ZNF677Q86XU0 584 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 RTKN2Q8IZC4 609 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 VPS52Q8N1B4 723 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 NETO2Q8NC67 525 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 SPDYE1Q8NFV5 336 aaPredicted RBP14.19□□□□□ -0.14
CTTN-201ENST00000301843 DLGAP2Q9P1A6 1054 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 SLC9A2Q9UBY0 812 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 MAGEB2O15479 319 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 MT-ND3P03897 115 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 PTPN20Q4JDL3 420 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 RNF220Q5VTB9 566 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 TMEM154Q6P9G4 183 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 C1orf228Q6PIY5 440 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 ASCC2Q9H1I8 757 aaPredicted RBP14.19□□□□□ -0.14
CTTN-201ENST00000301843 SYNCQ9H7C4 482 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 KIAA1217Q5T5P2 1943 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 KBTBD13C9JR72 458 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 CAPN9O14815 690 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 TROVE2P10155 538 aaKnown RBP eCLIP14.19□□□□□ -0.14
CTTN-201ENST00000301843 MYL2P10916 166 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 PTPN4P29074 926 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 SKIV2L2P42285 1042 aaKnown RBP14.19□□□□□ -0.14
CTTN-201ENST00000301843 ARFIP2P53365 341 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 KDSRQ06136 332 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 C1QBPQ07021 282 aaKnown RBP14.19□□□□□ -0.14
CTTN-201ENST00000301843 PTK7Q13308 1070 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 ZCCHC23Q6ZST2 131 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 LRRC71Q8N4P6 559 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 ZNF276Q8N554 614 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 PPM1NQ8N819 430 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 TTLL6Q8N841 843 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 DNAJC9Q8WXX5 260 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 MCUR1Q96AQ8 359 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 TTC25Q96NG3 672 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 ZCWPW1Q9H0M4 648 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 GPATCH2LQ9NWQ4 482 aa14.19□□□□□ -0.14
CTTN-201ENST00000301843 PIH1D1Q9NWS0 290 aaKnown RBP14.19□□□□□ -0.14
CTTN-201ENST00000301843 E2F8A0AVK6 867 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 LRCH4O75427 683 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 ENO1P06733 434 aaKnown RBP14.18□□□□□ -0.14
CTTN-201ENST00000301843 PSAPP07602 524 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 AMPD1P23109 780 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 SNRPFP62306 86 aaKnown RBP14.18□□□□□ -0.14
CTTN-201ENST00000301843 LMNB2Q03252 620 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 SGSM1Q2NKQ1 1148 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 PARP6Q2NL67 630 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 EFHC2Q5JST6 749 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 C4orf50Q6ZRC1 276 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 RIBC1Q8N443 379 aaPredicted RBP14.18□□□□□ -0.14
CTTN-201ENST00000301843 PHC3Q8NDX5 983 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 MCPH1Q8NEM0 835 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 DCAKDQ8WVC6 231 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 ACAP3Q96P50 834 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 CYTH2Q99418 400 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 SHCBP1LQ9BZQ2 653 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 IMPG2Q9BZV3 1241 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 NMUR2Q9GZQ4 415 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 VWA5AO00534 786 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 STAM2O75886 525 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 CCND2P30279 289 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 ARL4CP56559 192 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 MXRA7P84157 204 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 CNTN2Q02246 1040 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 CYLDQ9NQC7 956 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 BATF3Q9NR55 127 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 HMGXB4Q9UGU5 601 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 CNTNAP2Q9UHC6 1331 aa14.18□□□□□ -0.14
CTTN-201ENST00000301843 WDR46O15213 610 aaKnown RBP14.17□□□□□ -0.14
CTTN-201ENST00000301843 GMPRP36959 345 aa14.17□□□□□ -0.14
CTTN-201ENST00000301843 HMGCS2P54868 508 aa14.17□□□□□ -0.14
CTTN-201ENST00000301843 EIF3EP60228 445 aaKnown RBP14.17□□□□□ -0.14
CTTN-201ENST00000301843 PSMC1P62191 440 aaKnown RBP14.17□□□□□ -0.14
CTTN-201ENST00000301843 THOC5Q13769 683 aaKnown RBP14.17□□□□□ -0.14
CTTN-201ENST00000301843 SNX30Q5VWJ9 437 aa14.17□□□□□ -0.14
CTTN-201ENST00000301843 ISLR2Q6UXK2 745 aa14.17□□□□□ -0.14
CTTN-201ENST00000301843 TRIM50Q86XT4 487 aa14.17□□□□□ -0.14
CTTN-201ENST00000301843 RELL1Q8IUW5 271 aa14.17□□□□□ -0.14
CTTN-201ENST00000301843 ATP11CQ8NB49 1132 aa14.17□□□□□ -0.14
CTTN-201ENST00000301843 KCTD6Q8NC69 237 aa14.17□□□□□ -0.14
CTTN-201ENST00000301843 ZBED3Q96IU2 234 aaPredicted RBP14.17□□□□□ -0.14
CTTN-201ENST00000301843 TRIM55Q9BYV6 548 aa14.17□□□□□ -0.14
CTTN-201ENST00000301843 PCDH9Q9HC56 1237 aa14.17□□□□□ -0.14
CTTN-201ENST00000301843 TNS1Q9HBL0 1735 aaKnown RBP14.17□□□□□ -0.14
CTTN-201ENST00000301843 CXorf49A8MYA2 514 aaPredicted RBP14.17□□□□□ -0.14
CTTN-201ENST00000301843 H3BRJ5 948 aa14.17□□□□□ -0.14
CTTN-201ENST00000301843 ZC3H11AO75152 810 aaKnown RBP eCLIP14.17□□□□□ -0.141e-8■■□□□ 14.5
CTTN-201ENST00000301843 TBX10O75333 385 aa14.17□□□□□ -0.14
CTTN-201ENST00000301843 F7P08709 466 aaPredicted RBP14.17□□□□□ -0.14
CTTN-201ENST00000301843 RBP3P10745 1247 aa14.17□□□□□ -0.14
CTTN-201ENST00000301843 KRT3P12035 628 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms