RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 PCSK1P29120 753 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 RGS7P49802 495 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 VSNL1P62760 191 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 OGDHQ02218 1023 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 ZNF252P-AS1Q0IIN9 211 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 ACAP1Q15027 740 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 CLLU1OSQ5K130 101 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 LRRC38Q5VT99 294 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 KATNAL2Q8IYT4 538 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 DIS3LQ8TF46 1054 aaKnown RBP16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 LPIN3Q9BQK8 851 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 SLITRK6Q9H5Y7 841 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 ARFGAP3Q9NP61 516 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 STIM2Q9P246 746 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 MTUS1Q9ULD2 1270 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 PCDHB7Q9Y5E2 793 aa16.55■□□□□ 0.24
HERPUD1-201ENST00000300302 F8VP50 259 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 ENPP3O14638 875 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 ACAT1P24752 427 aaKnown RBP16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 CETN2P41208 172 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 ACADSBP45954 432 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 RNASELQ05823 741 aaKnown RBP16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 C1orf53Q5VUE5 145 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 FAM183BPQ6ZVS7 135 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 ABI1Q8IZP0 508 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 CCDC26Q8TAB7 109 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 JOSD2Q8TAC2 188 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 HNRNPLLQ8WVV9 542 aaKnown RBP16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 FAM193BQ96PV7 902 aaPredicted RBP16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 SYT15Q9BQS2 421 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 CDH9Q9ULB4 789 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 M0QZQ0 153 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 ZRANB2O95218 330 aaKnown RBP eCLIP16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 CYP11A1P05108 521 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 DESP17661 470 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 TAS2R40P59535 323 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 GPNMBQ14956 572 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 MAP9Q49MG5 647 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 DAB2IPQ5VWQ8 1189 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 AADACL2Q6P093 401 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 SLC13A5Q86YT5 568 aaPredicted RBP16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 EXD1Q8NHP7 514 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 MAIP1Q8WWC4 291 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 HSFY1Q96LI6 401 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 MED10Q9BTT4 135 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 DUSP16Q9BY84 665 aa16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 TIMM13Q9Y5L4 95 aaPredicted RBP16.54■□□□□ 0.24
HERPUD1-201ENST00000300302 TULP2O00295 520 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 PIK3R2O00459 728 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 XPO1O14980 1071 aaKnown RBP16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 SART1O43290 800 aaKnown RBP16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 ATP2C2O75185 946 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 RNF8O76064 485 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 PLA2G4AP47712 749 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 GJA8P48165 433 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 SLC6A3Q01959 620 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 PLCB3Q01970 1234 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 DSC1Q08554 894 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 HADHQ16836 314 aaKnown RBP16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 PAN2Q504Q3 1202 aaKnown RBP16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 ODF2Q5BJF6 829 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 MDH1BQ5I0G3 518 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 MAATS1Q7Z4T9 603 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 ADAT2Q7Z6V5 191 aaKnown RBP16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 CCDC50Q8IVM0 306 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 FUKQ8N0W3 1084 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 RSPH1Q8WYR4 309 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 SUSD3Q96L08 255 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 DDX47Q9H0S4 455 aaKnown RBP16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 ASNSD1Q9NWL6 643 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 DDX56Q9NY93 547 aaKnown RBP16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 LRFN2Q9ULH4 789 aa16.53■□□□□ 0.24
HERPUD1-201ENST00000300302 HOXA2O43364 376 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 NPR3P17342 541 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 GPD1P21695 349 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 RPL34P49207 117 aaKnown RBP16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 ZNF143P52747 638 aaPredicted RBP16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 SLC7A5Q01650 507 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 FAAP100Q0VG06 881 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 TRIM60Q495X7 471 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 ZFYVE27Q5T4F4 411 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 OLFML1Q6UWY5 402 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 POLNQ7Z5Q5 900 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 IFT20Q8IY31 132 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 RCOR2Q8IZ40 523 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 EMC1Q8N766 993 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 HDAC7Q8WUI4 952 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 RBM41Q96IZ5 413 aaKnown RBP16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 ACBD6Q9BR61 282 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 TBC1D13Q9NVG8 400 aa16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 DMGDHQ9UI17 866 aaKnown RBP16.52■□□□□ 0.24
HERPUD1-201ENST00000300302 HEXIM1O94992 359 aaKnown RBP16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 KRT7P08729 469 aa16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 TKTP29401 623 aaKnown RBP16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 GJC1P36383 396 aa16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 SCNN1AP37088 669 aa16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 BRCC3P46736 316 aa16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 TLE2Q04725 743 aa16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 SMC1AQ14683 1233 aaKnown RBP16.52■□□□□ 0.23
HERPUD1-201ENST00000300302 CD300LGQ6UXG3 332 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms