RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ACO1P21399 889 aaKnown RBP14.08□□□□□ -0.15
CHRFAM7A-201ENST00000299847 NT5C2P49902 561 aa14.08□□□□□ -0.15
CHRFAM7A-201ENST00000299847 STILQ15468 1287 aa14.08□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ARMC6Q6NXE6 501 aa14.08□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CBWD2Q8IUF1 395 aa14.08□□□□□ -0.15
CHRFAM7A-201ENST00000299847 FBXO16Q8IX29 292 aaPredicted RBP14.08□□□□□ -0.15
CHRFAM7A-201ENST00000299847 LPAR1Q92633 364 aa14.08□□□□□ -0.15
CHRFAM7A-201ENST00000299847 RPRD1AQ96P16 312 aaPredicted RBP14.08□□□□□ -0.15
CHRFAM7A-201ENST00000299847 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.08□□□□□ -0.15
CHRFAM7A-201ENST00000299847 C17orf102A2RUQ5 167 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 LRG1P02750 347 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CLK1P49759 484 aaKnown RBP14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 RGS4P49798 205 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CENPPQ6IPU0 288 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 DCP1BQ8IZD4 617 aaKnown RBP14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SCFD2Q8WU76 684 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ISCUQ9H1K1 167 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 AGPAT3Q9NRZ7 376 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PSD3Q9NYI0 1048 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 NYAP2Q9P242 653 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PHTF1Q9UMS5 762 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 NFIBO00712 420 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 DEAF1O75398 565 aaPredicted RBP14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CEP78Q5JTW2 689 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TRIM48Q8IWZ4 208 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 GPRC5AQ8NFJ5 357 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 OSBPL10Q9BXB5 764 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 DLGAP2Q9P1A6 1054 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TRPM1Q7Z4N2 1603 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 MT-CO1P00395 513 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SERPINB3P29508 390 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ACADSBP45954 432 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TSGA10IPQ3SY00 556 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TRMT6Q9UJA5 497 aaKnown RBP14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SLC25A13Q9UJS0 675 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 BCORL1Q5H9F3 1711 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FOXN3O00409 490 aaPredicted RBP14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 EIF3DO15371 548 aaKnown RBP eCLIP14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SBK1Q52WX2 424 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SLC38A7Q9NVC3 462 aa14.08□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ALKQ9UM73 1620 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 KDM6AO15550 1401 aaPredicted RBP14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PLA2R1Q13018 1463 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 KIAA0391O15091 583 aaKnown RBP14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 LZTS3O60299 673 aaPredicted RBP14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 GRB10Q13322 594 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 EFHC1Q5JVL4 640 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TUBGCP3Q96CW5 907 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SPATA16Q9BXB7 569 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 DEFB129Q9H1M3 183 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 GID8Q9NWU2 228 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 HPS5Q9UPZ3 1129 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PREX2Q70Z35 1606 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ABCC3O15438 1527 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 C19orf81C9J6K1 198 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ASS1P00966 412 aaKnown RBP14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TFRCP02786 760 aaKnown RBP14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FDX1P10109 184 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 DPEP1P16444 411 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TAF6P49848 677 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 KLC1Q07866 573 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PTGISQ16647 500 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 RABL6Q3YEC7 729 aaPredicted RBP14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ERAP2Q6P179 960 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SEMA4DQ92854 862 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 HEY2Q9UBP5 337 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CCT8L1PA6NM43 557 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ZNF286BP0CG31 522 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ARP10275 920 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 LRRC8BQ6P9F7 803 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SLC47A2Q86VL8 602 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ACER1Q8TDN7 264 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 MTA3Q9BTC8 594 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TMEM121Q9BTD3 319 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 AP3B1O00203 1094 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 NBNO60934 754 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 MBL2P11226 248 aaPredicted RBP14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CDH2P19022 906 aaPredicted RBP14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PTK6Q13882 451 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 RCN1Q15293 331 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CCDC134Q9H6E4 229 aa14.07□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TTLL13PA6NNM8 815 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 C16orf96A6NNT2 1141 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 GSNP06396 782 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 DDX5P17844 614 aaKnown RBP14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CENPCQ03188 943 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ITPK1Q13572 414 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 DAB2IPQ5VWQ8 1189 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SLC30A10Q6XR72 485 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 RPS6KL1Q9Y6S9 549 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 NR5A2O00482 541 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 VWA5AO00534 786 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ZC3H11AO75152 810 aaKnown RBP eCLIP14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 DNAJB2P25686 324 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ARHGAP17Q68EM7 881 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CALML6Q8TD86 181 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ANKS1AQ92625 1134 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 KRT35Q92764 455 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 RNPEPQ9H4A4 650 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms