RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 TMEM63AO94886 807 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 FGFR1P11362 822 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 CTCFP49711 727 aaPredicted RBP11.72□□□□□ -0.53
IDH3A-201ENST00000299518 OR6B2Q6IFH4 312 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 RFX6Q8HWS3 928 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 CCT6BQ92526 530 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 FAM167AQ96KS9 214 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 DNALI1O14645 258 aaPredicted RBP11.72□□□□□ -0.53
IDH3A-201ENST00000299518 SCTRP47872 440 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 WDR4P57081 412 aaKnown RBP11.72□□□□□ -0.53
IDH3A-201ENST00000299518 GPX6P59796 221 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 BASP1P80723 227 aaKnown RBP11.72□□□□□ -0.53
IDH3A-201ENST00000299518 HIC1Q14526 733 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 CA9Q16790 459 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 PPP1R26Q5T8A7 1209 aaPredicted RBP11.72□□□□□ -0.53
IDH3A-201ENST00000299518 CGB2Q6NT52 195 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 PMF1Q6P1K2 205 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 KIF2BQ8N4N8 673 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 KIF12Q96FN5 646 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 RUNDC3BQ96NL0 473 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 C16orf70Q9BSU1 422 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 CNOT10Q9H9A5 744 aaKnown RBP11.72□□□□□ -0.53
IDH3A-201ENST00000299518 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.72□□□□□ -0.53
IDH3A-201ENST00000299518 PIH1D1Q9NWS0 290 aaKnown RBP11.72□□□□□ -0.53
IDH3A-201ENST00000299518 HEY1Q9Y5J3 304 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 SNX9Q9Y5X1 595 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 MRPL42Q9Y6G3 142 aaKnown RBP11.72□□□□□ -0.53
IDH3A-201ENST00000299518 LOC285556D6RIA3 1793 aa11.72□□□□□ -0.53
IDH3A-201ENST00000299518 C5orf60A6NFR6 353 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 H3BRB1 525 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 GABBR2O75899 941 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 KDELR1P24390 212 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 GPD2P43304 727 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 VCPP55072 806 aaKnown RBP11.71□□□□□ -0.53
IDH3A-201ENST00000299518 ACTN3Q08043 901 aaPredicted RBP11.71□□□□□ -0.53
IDH3A-201ENST00000299518 MARCH8Q5T0T0 291 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 TMEM176AQ96HP8 235 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 RMDN2Q96LZ7 410 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 OSMRQ99650 979 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 TUT1Q9H6E5 874 aaKnown RBP11.71□□□□□ -0.53
IDH3A-201ENST00000299518 TMPRSS4Q9NRS4 437 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 TSPAN16Q9UKR8 245 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 CLEC11AQ9Y240 323 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 CEP83Q9Y592 693 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 CILPO75339 1184 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 EIF4BP23588 611 aaKnown RBP11.71□□□□□ -0.53
IDH3A-201ENST00000299518 EPHX2P34913 555 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 RPL22P35268 128 aaKnown RBP11.71□□□□□ -0.53
IDH3A-201ENST00000299518 DNAJC3Q13217 504 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 FAM183BPQ6ZVS7 135 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 CCDC125Q86Z20 511 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 PGLYRP2Q96PD5 576 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 NGRNQ9NPE2 291 aaKnown RBP11.71□□□□□ -0.53
IDH3A-201ENST00000299518 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 MFHAS1Q9Y4C4 1052 aa11.71□□□□□ -0.53
IDH3A-201ENST00000299518 ZNF638Q14966 1978 aaKnown RBP11.71□□□□□ -0.53
IDH3A-201ENST00000299518 A6NNZ2 444 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 PDHXO00330 501 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 NPTXRO95502 500 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 SNAI1O95863 264 aaPredicted RBP11.71□□□□□ -0.54
IDH3A-201ENST00000299518 BBS9Q3SYG4 887 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 TUBB8Q3ZCM7 444 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 RNASEH2BQ5TBB1 312 aaKnown RBP11.71□□□□□ -0.54
IDH3A-201ENST00000299518 CCDC197Q8NCU1 140 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 RXFP2Q8WXD0 754 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 CPT1BQ92523 772 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 RBM41Q96IZ5 413 aaKnown RBP11.71□□□□□ -0.54
IDH3A-201ENST00000299518 ADPGKQ9BRR6 497 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 USP18Q9UMW8 372 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 CLUHO75153 1309 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 SIGLEC16A6NMB1 481 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 PFKMP08237 780 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 SMPD1P17405 629 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 RPA3P35244 121 aaPredicted RBP11.71□□□□□ -0.54
IDH3A-201ENST00000299518 CDH6P55285 790 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 MFSD5Q6N075 450 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 ZCCHC9Q8N567 271 aaKnown RBP11.71□□□□□ -0.54
IDH3A-201ENST00000299518 SLC40A1Q9NP59 571 aa11.71□□□□□ -0.54
IDH3A-201ENST00000299518 TPX2Q9ULW0 747 aaKnown RBP11.71□□□□□ -0.54
IDH3A-201ENST00000299518 TSPAN1O60635 241 aa11.7□□□□□ -0.54
IDH3A-201ENST00000299518 FAM155BO75949 473 aa11.7□□□□□ -0.54
IDH3A-201ENST00000299518 SLC25A27O95847 323 aa11.7□□□□□ -0.54
IDH3A-201ENST00000299518 KRT15P19012 456 aa11.7□□□□□ -0.54
IDH3A-201ENST00000299518 MGAT5Q09328 741 aa11.7□□□□□ -0.54
IDH3A-201ENST00000299518 MYO1EQ12965 1108 aa11.7□□□□□ -0.54
IDH3A-201ENST00000299518 TMEM132DQ14C87 1099 aa11.7□□□□□ -0.54
IDH3A-201ENST00000299518 PPP6R3Q5H9R7 873 aaPredicted RBP11.7□□□□□ -0.54
IDH3A-201ENST00000299518 SPDYCQ5MJ68 293 aa11.7□□□□□ -0.54
IDH3A-201ENST00000299518 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.7□□□□□ -0.54
IDH3A-201ENST00000299518 CTU1Q7Z7A3 348 aaKnown RBP11.7□□□□□ -0.54
IDH3A-201ENST00000299518 TGS1Q96RS0 853 aaKnown RBP11.7□□□□□ -0.54
IDH3A-201ENST00000299518 BCO2Q9BYV7 579 aa11.7□□□□□ -0.54
IDH3A-201ENST00000299518 RNF39Q9H2S5 420 aa11.7□□□□□ -0.54
IDH3A-201ENST00000299518 NXF3Q9H4D5 531 aaKnown RBP11.7□□□□□ -0.54
IDH3A-201ENST00000299518 DPP3Q9NY33 737 aa11.7□□□□□ -0.54
IDH3A-201ENST00000299518 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.7□□□□□ -0.54
IDH3A-201ENST00000299518 KCNH4Q9UQ05 1017 aa11.7□□□□□ -0.54
IDH3A-201ENST00000299518 CHMP2BQ9UQN3 213 aa11.7□□□□□ -0.54
IDH3A-201ENST00000299518 BTBD19C9JJ37 291 aa11.7□□□□□ -0.54
IDH3A-201ENST00000299518 UBOX5O94941 541 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms