RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 ZNF618Q5T7W0 954 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 LRRC38Q5VT99 294 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 ZDHHC17Q8IUH5 632 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 BBOF1Q8ND07 529 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 FERMT1Q9BQL6 677 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 RNF208Q9H0X6 261 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 VPS18Q9P253 973 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 ZSCAN5CA6NGD5 496 aaPredicted RBP13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 ARL5CA6NH57 179 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 PIRO00625 290 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 KCNJ1P48048 391 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 NNTQ13423 1086 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 ACAP1Q15027 740 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 SMTNL2Q2TAL5 461 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 DAB2IPQ5VWQ8 1189 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 CCDC89Q8N998 374 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 ANKRD52Q8NB46 1076 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 ATL2Q8NHH9 583 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 RXFP2Q8WXD0 754 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 CASKIN2Q8WXE0 1202 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 SYT15Q9BQS2 421 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 TRPV6Q9H1D0 765 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 VIPAS39Q9H9C1 493 aa13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 AGO3Q9H9G7 860 aaKnown RBP13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 TIMM13Q9Y5L4 95 aaPredicted RBP13.84□□□□□ -0.19
PPP1CB-201ENST00000296122 ERBB2P04626 1255 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 RARAP10276 462 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 GPD2P43304 727 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 COPS2P61201 443 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 TFDP2Q14188 446 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 ZBTB6Q15916 424 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 XYLT1Q86Y38 959 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 B3GALNT2Q8NCR0 500 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 CCHCR1Q8TD31 782 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 RSAD2Q8WXG1 361 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.83□□□□□ -0.23e-10■■■□□ 16.2
PPP1CB-201ENST00000296122 GDAP2Q9NXN4 497 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 DSEQ9UL01 958 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 STAP1Q9ULZ2 295 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 TRAPPC3O43617 180 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 CDH6P55285 790 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 TAS2R40P59535 323 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 GRIK3Q13003 919 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 EFHC1Q5JVL4 640 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 DCAF12L1Q5VU92 463 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 DDX42Q86XP3 938 aaKnown RBP eCLIP13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 CPNE8Q86YQ8 564 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 HAUS1Q96CS2 278 aa13.83□□□□□ -0.2
PPP1CB-201ENST00000296122 SYNJ2BP-COX16A0A087WUM0 186 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 NDC80O14777 642 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 PTPN1P18031 435 aaKnown RBP13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 MDH1BQ5I0G3 518 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 ALS2CLQ60I27 953 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 CEP128Q6ZU80 1094 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 RPAINQ86UA6 219 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 FNIP1Q8TF40 1166 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 TSPYL1Q9H0U9 437 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 GDF3Q9NR23 364 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 COX16Q9P0S2 106 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 BCCIPQ9P287 314 aaKnown RBP eCLIP13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 PTCH2Q9Y6C5 1203 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 A0A0U1RQF3 1178 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 LRPAP1P30533 357 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 OR1G1P47890 313 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 SLC6A3Q01959 620 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 KRT17Q04695 432 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 DHX9Q08211 1270 aaKnown RBP13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 PTP4A2Q12974 167 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 TRIP13Q15645 432 aaPredicted RBP13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 TFDP3Q5H9I0 405 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 SYDE1Q6ZW31 735 aaPredicted RBP13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 PRELID2Q8N945 189 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 JOSD2Q8TAC2 188 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 FAM71BQ8TC56 605 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 SH3TC2Q8TF17 1288 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 ACSF2Q96CM8 615 aaPredicted RBP13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 FTHL17Q9BXU8 183 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 ERVK-5Q9HDB9 667 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 KANSL3Q9P2N6 904 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 SGK1O00141 431 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 FSCN2O14926 492 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 MCF2LO15068 1137 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 TUSC3Q13454 348 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 LPIN1Q14693 890 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 ARHGAP17Q68EM7 881 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 FAM183BPQ6ZVS7 135 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 SCUBE3Q8IX30 993 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 HASPINQ8TF76 798 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 SEPT8Q92599 483 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 CD101Q93033 1021 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 RNF34Q969K3 372 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 HSFY1Q96LI6 401 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 DEFB118Q96PH6 123 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 TMEM59LQ9UK28 342 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 ATP8A1Q9Y2Q0 1164 aa13.82□□□□□ -0.2
PPP1CB-201ENST00000296122 A0A1W2PQ45 241 aaPredicted RBP13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 A0A1W2PQY0 241 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 ARVCFO00192 962 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 AP1G2O75843 785 aa13.81□□□□□ -0.2
PPP1CB-201ENST00000296122 HOXC8P31273 242 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms