RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 MAGEB2O15479 319 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 NPNTQ6UXI9 565 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 NLRP4Q96MN2 994 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 CHMP2BQ9UQN3 213 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 LCTP09848 1927 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 EIF4BP23588 611 aaKnown RBP20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 KDELR1P24390 212 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 MMRN1Q13201 1228 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 EFHC2Q5JST6 749 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 TREML2Q5T2D2 321 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 SH3PXD2AQ5TCZ1 1133 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 EEF1DP3Q658K8 133 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 ZPBP2Q6X784 338 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 RFX6Q8HWS3 928 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 TWNKQ96RR1 684 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 PPP1R16BQ96T49 567 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 VPS33BQ9H267 617 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 ZNF112Q9UJU3 913 aa20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 CPSF3Q9UKF6 684 aaKnown RBP20.51■□□□□ 0.87
NKX6-1-201ENST00000295886 MAFO75444 373 aaPredicted RBP20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 ERBB2P04626 1255 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 ICAM3P32942 547 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 RFC5P40937 340 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 YARSP54577 528 aaKnown RBP20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 PLEKHG4Q58EX7 1191 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 PPP1R2P3Q6NXS1 205 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 IGDCC3Q8IVU1 814 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 PPIL6Q8IXY8 311 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 NAT8LQ8N9F0 302 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 TCP10LQ8TDR4 215 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 LRRN4Q8WUT4 740 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 C12orf42Q96LP6 360 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 TRIM6Q9C030 488 aaPredicted RBP20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 SLC24A3Q9HC58 644 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 NOP53Q9NZM5 478 aaKnown RBP20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 DOCK1Q14185 1865 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 ABLIM1O14639 778 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 CXCL8P10145 99 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 ARL4CP56559 192 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 ZC3H18Q86VM9 953 aaKnown RBP20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 NIPA2Q8N8Q9 360 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 KCTD6Q8NC69 237 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 C10orf82Q8WW14 230 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 SDCBP2Q9H190 292 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 HOXC10Q9NYD6 342 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 XPO7Q9UIA9 1087 aaKnown RBP20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 SNCAIPQ9Y6H5 919 aa20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 TNS1Q9HBL0 1735 aaKnown RBP20.5■□□□□ 0.87
NKX6-1-201ENST00000295886 INO80B-WBP1J3KQ70 363 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 MAP3K6O95382 1288 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 T-ENOLP0DO92 83 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 ATP11AP98196 1134 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 HSDL1Q3SXM5 330 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 ZNF772Q68DY9 489 aaPredicted RBP20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 PALM2Q8IXS6 379 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 INO80BQ9C086 356 aaPredicted RBP20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 TXLNGQ9NUQ3 528 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 BTBD7Q9P203 1132 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 NKX1-2Q9UD57 310 aaPredicted RBP20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 SLC24A2Q9UI40 661 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 SOWAHBA6NEL2 793 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 RXRBP28702 533 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 PTPN7P35236 360 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 CCDC15Q0P6D6 951 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 TAF1BQ53T94 588 aaPredicted RBP20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 ATP11CQ8NB49 1132 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 PTPRN2Q92932 1015 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 ZNF570Q96NI8 536 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 ZNF518BQ9C0D4 1074 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 SMYD3Q9H7B4 428 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 PCDHGC3Q9UN70 934 aa20.49■□□□□ 0.87
NKX6-1-201ENST00000295886 SIGLEC16A6NMB1 481 aa20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 C19orf81C9J6K1 198 aa20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 AVILO75366 819 aa20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 ARIH2O95376 493 aa20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 CCND1P24385 295 aa20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 EPHB2P29323 1055 aa20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 CDH5P33151 784 aaPredicted RBP20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 EIF3EP60228 445 aaKnown RBP20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 SEPT7Q16181 437 aaKnown RBP20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 RFWD2Q8NHY2 731 aa20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 KLRG1Q96E93 195 aa20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 ASCC2Q9H1I8 757 aaPredicted RBP20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 SENP1Q9P0U3 644 aa20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 EIF4E1BA6NMX2 242 aaKnown RBP20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 SKAP2O75563 359 aaPredicted RBP20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 MIPP30301 263 aa20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 GCLCP48506 637 aaPredicted RBP20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 TAP1Q03518 808 aa20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 BBS12Q6ZW61 710 aa20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 NCAPG2Q86XI2 1143 aa20.48■□□□□ 0.87
NKX6-1-201ENST00000295886 RBP3P10745 1247 aa20.47■□□□□ 0.87
NKX6-1-201ENST00000295886 DALRD3Q5D0E6 543 aaKnown RBP20.47■□□□□ 0.87
NKX6-1-201ENST00000295886 POLNQ7Z5Q5 900 aa20.47■□□□□ 0.87
NKX6-1-201ENST00000295886 DEFB132Q7Z7B7 95 aa20.47■□□□□ 0.87
NKX6-1-201ENST00000295886 MTDHQ86UE4 582 aaKnown RBP20.47■□□□□ 0.87
NKX6-1-201ENST00000295886 XYLT1Q86Y38 959 aa20.47■□□□□ 0.87
NKX6-1-201ENST00000295886 DNERQ8NFT8 737 aa20.47■□□□□ 0.87
NKX6-1-201ENST00000295886 TRPM4Q8TD43 1214 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms