RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 IRGCQ6NXR0 463 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 CCNJLQ8IV13 435 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.4■□□□□ 0.06
CCNF-201ENST00000293968 ZNF668Q96K58 619 aaPredicted RBP15.4■□□□□ 0.06
CCNF-201ENST00000293968 MAD1L1Q9Y6D9 718 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 TMEM191CA6NGB0 347 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 AHCYL1O43865 530 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 TMEM191BP0C7N4 346 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 SFNP31947 248 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 HADHQ16836 314 aaKnown RBP15.4■□□□□ 0.06
CCNF-201ENST00000293968 SCARA3Q6AZY7 606 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 UNC45BQ8IWX7 931 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 FAF2Q96CS3 445 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 SERAC1Q96JX3 654 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 SHCBP1LQ9BZQ2 653 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 KANSL3Q9P2N6 904 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 ADAMTSL1Q8N6G6 1762 aa15.4■□□□□ 0.06
CCNF-201ENST00000293968 KBTBD13C9JR72 458 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 VNN1O95497 513 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 PRKCEQ02156 737 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 IZUMO2Q6UXV1 221 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 RGS9BPQ6ZS82 235 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 ZNF395Q9H8N7 513 aaPredicted RBP15.39■□□□□ 0.05
CCNF-201ENST00000293968 FBXO40Q9UH90 709 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 MEI4A8MW99 385 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 F5H423 210 aaPredicted RBP15.39■□□□□ 0.05
CCNF-201ENST00000293968 TXNDC9O14530 226 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 TM9SF1O15321 606 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 OPHN1O60890 802 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 RBP3P10745 1247 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 GARTP22102 1010 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 HSD17B4P51659 736 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 BAATQ14032 418 aaPredicted RBP15.39■□□□□ 0.05
CCNF-201ENST00000293968 PPP1R15BQ5SWA1 713 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 PRPF39Q86UA1 669 aaKnown RBP15.39■□□□□ 0.05
CCNF-201ENST00000293968 PHF13Q86YI8 300 aaPredicted RBP15.39■□□□□ 0.05
CCNF-201ENST00000293968 MCPH1Q8NEM0 835 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 ACSS3Q9H6R3 686 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 ZNF862O60290 1169 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 USP1O94782 785 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 CD48P09326 243 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 C1orf228Q6PIY5 440 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 BANPQ8N9N5 519 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 VPS11Q9H270 941 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 ANGPTL2Q9UKU9 493 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 TOM1L1O75674 476 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 TMEM63AO94886 807 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 KRT3P12035 628 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 CDKN2BP42772 138 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 EPHB1P54762 984 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 CDO1Q16878 200 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 SPATA18Q8TC71 538 aa15.39■□□□□ 0.05
CCNF-201ENST00000293968 CCDC124Q96CT7 223 aaKnown RBP15.39■□□□□ 0.05
CCNF-201ENST00000293968 ZNF70Q9UC06 446 aaPredicted RBP15.39■□□□□ 0.05
CCNF-201ENST00000293968 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.38■□□□□ 0.05
CCNF-201ENST00000293968 SPECC1L-ADORA2AF8WAN1 911 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 H0YIN7 160 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 C4BPAP04003 597 aaKnown RBP15.38■□□□□ 0.05
CCNF-201ENST00000293968 ACO1P21399 889 aaKnown RBP15.38■□□□□ 0.05
CCNF-201ENST00000293968 TBXAS1P24557 533 aaPredicted RBP15.38■□□□□ 0.05
CCNF-201ENST00000293968 RFC1P35251 1148 aaPredicted RBP15.38■□□□□ 0.05
CCNF-201ENST00000293968 PSMC1P62191 440 aaKnown RBP15.38■□□□□ 0.05
CCNF-201ENST00000293968 MCL1Q07820 350 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 CHI3L2Q15782 390 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 ALKBH8Q96BT7 664 aaKnown RBP15.38■□□□□ 0.05
CCNF-201ENST00000293968 NDE1Q9NXR1 346 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 DDX56Q9NY93 547 aaKnown RBP15.38■□□□□ 0.05
CCNF-201ENST00000293968 LNPEPQ9UIQ6 1025 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 DGAT1O75907 488 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 PSMD6Q15008 389 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 SCYL2Q6P3W7 929 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 ADGRD1Q6QNK2 874 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 NPNTQ6UXI9 565 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 ZCCHC23Q6ZST2 131 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 FBXL18Q96ME1 805 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 PDCD2LQ9BRP1 358 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 DRG1Q9Y295 367 aaKnown RBP15.38■□□□□ 0.05
CCNF-201ENST00000293968 ITGAVP06756 1048 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 FESP07332 822 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 MMP8P22894 467 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 NEK3P51956 506 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 PIGHQ14442 188 aaPredicted RBP15.38■□□□□ 0.05
CCNF-201ENST00000293968 OASLQ15646 514 aaKnown RBP15.38■□□□□ 0.05
CCNF-201ENST00000293968 SEPT12Q8IYM1 358 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 NLGN1Q8N2Q7 840 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 CLEC4DQ8WXI8 215 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 HEY1Q9Y5J3 304 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 ZNF541Q9H0D2 1346 aa15.38■□□□□ 0.05
CCNF-201ENST00000293968 LYPLA2O95372 231 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 AQP5P55064 265 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 MYL6P60660 151 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 ZNF252P-AS1Q0IIN9 211 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 NUDCD3Q8IVD9 361 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 IGDCC3Q8IVU1 814 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 FBXO27Q8NI29 283 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 VCPIP1Q96JH7 1222 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 SRPK1Q96SB4 655 aaKnown RBP15.37■□□□□ 0.05
CCNF-201ENST00000293968 ZNF184Q99676 751 aaPredicted RBP15.37■□□□□ 0.05
CCNF-201ENST00000293968 MTMR12Q9C0I1 747 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 CYP26B1Q9NR63 512 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms