RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 H7C4K7 107 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 CHI3L2Q15782 390 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 SYCP2LQ5T4T6 812 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 METTL7BQ6UX53 244 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 CEP70Q8NHQ1 597 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 SLC5A5Q92911 643 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 SEPT5Q99719 369 aaPredicted RBP13.29□□□□□ -0.28
PTCD1-201ENST00000292478 TRPC7Q9HCX4 862 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 TFR2Q9UP52 801 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 B2RBV5 119 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 TIMM44O43615 452 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 VCAM1P19320 739 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 PPP2R3CQ969Q6 453 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 FAM118BQ9BPY3 351 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 DDTLA6NHG4 134 aaPredicted RBP13.29□□□□□ -0.28
PTCD1-201ENST00000292478 SDR42E2A6NKP2 422 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 GOLGA8TH3BQL2 631 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 M0QYT0 321 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 ARHGEF7Q14155 803 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 SMAD1Q15797 465 aaKnown RBP13.29□□□□□ -0.28
PTCD1-201ENST00000292478 C16orf87Q6PH81 154 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 SPOCD1Q6ZMY3 1216 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 CHSY1Q86X52 802 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 FAM167BQ9BTA0 163 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 IDI2Q9BXS1 227 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 ADARB2Q9NS39 739 aaKnown RBP13.29□□□□□ -0.28
PTCD1-201ENST00000292478 AURKCQ9UQB9 309 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 O00370 1275 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 KPNA6O60684 536 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 EPHB2P29323 1055 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 TBX2Q13207 712 aaPredicted RBP13.29□□□□□ -0.28
PTCD1-201ENST00000292478 MGAT5BQ3V5L5 792 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 PLEKHH3Q7Z736 793 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 PATL1Q86TB9 770 aaKnown RBP13.29□□□□□ -0.28
PTCD1-201ENST00000292478 KIAA0895Q8NCT3 520 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 CCDC90BQ9GZT6 254 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 ITGA11Q9UKX5 1188 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 STAG3L1P0CL83 205 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 ENO3P13929 434 aaPredicted RBP13.29□□□□□ -0.28
PTCD1-201ENST00000292478 ZKSCAN4Q969J2 545 aaPredicted RBP13.29□□□□□ -0.28
PTCD1-201ENST00000292478 TMEM51Q9NW97 253 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 CD274Q9NZQ7 290 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 SH3BP1Q9Y3L3 701 aa13.29□□□□□ -0.28
PTCD1-201ENST00000292478 FAM237AA0A1B0GTK4 181 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 SUPT3HB4E1H0 165 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 PRPF4O43172 522 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTCD1-201ENST00000292478 OR1G1P47890 313 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 SERPINB8P50452 374 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 CORO7P57737 925 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 PGM5Q15124 567 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 GNASQ5JWF2 1037 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 PTRHD1Q6GMV3 140 aaKnown RBP13.28□□□□□ -0.28
PTCD1-201ENST00000292478 RNF180Q86T96 592 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 ABRAQ8N0Z2 381 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 IL17RAQ96F46 866 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 TMEM176AQ96HP8 235 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 PACSIN1Q9BY11 444 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 GGT7Q9UJ14 662 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 CLASP2O75122 1294 aaKnown RBP13.28□□□□□ -0.28
PTCD1-201ENST00000292478 SOAT2O75908 522 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 CYP3A4P08684 503 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 FCGRTP55899 365 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 PTENP60484 403 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 AGAP9Q5VTM2 703 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 RRM2BQ7LG56 351 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 PNMA5Q96PV4 448 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 UBE2OQ9C0C9 1292 aaKnown RBP13.28□□□□□ -0.28
PTCD1-201ENST00000292478 YIPF3Q9GZM5 350 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 LACRTQ9GZZ8 138 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 BLOC1S6Q9UL45 172 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 HMBSP08397 361 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 DSG3P32926 999 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 LHX1P48742 406 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 GCNT1Q02742 428 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 KLC1Q07866 573 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 PRAMEF18Q5VWM3 479 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 TAS1R2Q8TE23 839 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 TMA16Q96EY4 203 aaKnown RBP13.28□□□□□ -0.28
PTCD1-201ENST00000292478 PCDHB7Q9Y5E2 793 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 DUSP10Q9Y6W6 482 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 FRMPD4Q14CM0 1322 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 PRRG1O14668 218 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 PJA2O43164 708 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 STX5Q13190 355 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 PCSK7Q16549 785 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 C15orf52Q6ZUT6 534 aaKnown RBP13.28□□□□□ -0.28
PTCD1-201ENST00000292478 SLFN11Q7Z7L1 901 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 PRPF39Q86UA1 669 aaKnown RBP13.28□□□□□ -0.28
PTCD1-201ENST00000292478 THTPAQ9BU02 230 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 ILKAPQ9H0C8 392 aaPredicted RBP13.28□□□□□ -0.28
PTCD1-201ENST00000292478 LRRC40Q9H9A6 602 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 KCND1Q9NSA2 647 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 DDIT4Q9NX09 232 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 MARCOQ9UEW3 520 aaPredicted RBP13.28□□□□□ -0.28
PTCD1-201ENST00000292478 DRG1Q9Y295 367 aaKnown RBP13.28□□□□□ -0.28
PTCD1-201ENST00000292478 PKP3Q9Y446 797 aa13.28□□□□□ -0.28
PTCD1-201ENST00000292478 NCAM2O15394 837 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 AP1G2O75843 785 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 EGFRP00533 1210 aa13.27□□□□□ -0.28
PTCD1-201ENST00000292478 TGM2P21980 687 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms