RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 OR6B3Q8NGW1 331 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 TTC8Q8TAM2 541 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 MYCBPAPQ8TBZ2 947 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 NELL1Q92832 810 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 USP13Q92995 863 aaPredicted RBP11.18□□□□□ -0.62
SNF8-201ENST00000290330 SYAP1Q96A49 352 aaPredicted RBP11.18□□□□□ -0.62
SNF8-201ENST00000290330 PCED1BQ96HM7 432 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 FAM83CQ9BQN1 747 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 SNX25Q9H3E2 840 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 VRTNQ9H8Y1 702 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 PRMT8Q9NR22 394 aaPredicted RBP11.18□□□□□ -0.62
SNF8-201ENST00000290330 GKN1Q9NS71 199 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 TDP1Q9NUW8 608 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 THG1LQ9NWX6 298 aaKnown RBP11.18□□□□□ -0.62
SNF8-201ENST00000290330 NXF1Q9UBU9 619 aaKnown RBP11.18□□□□□ -0.62
SNF8-201ENST00000290330 CCL26Q9Y258 94 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 USP34Q70CQ2 3546 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 ZFHX2Q9C0A1 2572 aaPredicted RBP11.17□□□□□ -0.62
SNF8-201ENST00000290330 PHACTR2O75167 634 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 RHOBTB3O94955 611 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 C4BPAP04003 597 aaKnown RBP11.17□□□□□ -0.62
SNF8-201ENST00000290330 NR3C1P04150 777 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 PTPN1P18031 435 aaKnown RBP11.17□□□□□ -0.62
SNF8-201ENST00000290330 GRIK1P39086 918 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 DLG4P78352 724 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 DPYDQ12882 1025 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 BIRC3Q13489 604 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 ZNF268Q14587 947 aaPredicted RBP11.17□□□□□ -0.62
SNF8-201ENST00000290330 GSE1Q14687 1217 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 MDH1BQ5I0G3 518 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 WDR44Q5JSH3 913 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 TDRD10Q5VZ19 366 aaKnown RBP11.17□□□□□ -0.62
SNF8-201ENST00000290330 TXNDC11Q6PKC3 985 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 KRBA2Q6ZNG9 492 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 FSIP1Q8NA03 581 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 ZBTB44Q8NCP5 570 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 RIN3Q8TB24 985 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 SPATA17Q96L03 361 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 CEP295NLQ96MC4 621 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 CYP2S1Q96SQ9 504 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 IER2Q9BTL4 223 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 GOLPH3LQ9H4A5 285 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 DPEP3Q9H4B8 488 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 KIF9Q9HAQ2 790 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 GDPD2Q9HCC8 539 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 TRAF3IP3Q9Y228 551 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 MYO15AQ9UKN7 3530 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 TICRRQ7Z2Z1 1910 aa11.17□□□□□ -0.62
SNF8-201ENST00000290330 PTPRZ1P23471 2315 aaPredicted RBP11.17□□□□□ -0.62
SNF8-201ENST00000290330 A8MXQ7 604 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 TRIM66O15016 1216 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 KINO60870 393 aaKnown RBP11.16□□□□□ -0.62
SNF8-201ENST00000290330 ZNF202O95125 648 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 KIF20AO95235 890 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 VNN1O95497 513 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 FAM160A1Q05DH4 1040 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 RUNX3Q13761 415 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 NCOA4Q13772 614 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 GAS6Q14393 721 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 ITPRIPL2Q3MIP1 535 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 ZACNQ401N2 412 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 ZNF667Q5HYK9 610 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 DENND5BQ6ZUT9 1274 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 SUMF1Q8NBK3 374 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 TMC2Q8TDI7 906 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 ATRIPQ8WXE1 791 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 CCDC47Q96A33 483 aaKnown RBP11.16□□□□□ -0.62
SNF8-201ENST00000290330 ELMO3Q96BJ8 720 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 C8orf48Q96LL4 319 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 SLC22A12Q96S37 553 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 HPS4Q9NQG7 708 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 RBM12Q9NTZ6 932 aaKnown RBP11.16□□□□□ -0.62
SNF8-201ENST00000290330 ZSCAN32Q9NX65 697 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 GCNT4Q9P109 453 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 PCDHGA2Q9Y5H1 932 aa11.16□□□□□ -0.62
SNF8-201ENST00000290330 NUP210Q8TEM1 1887 aaPredicted RBP11.16□□□□□ -0.62
SNF8-201ENST00000290330 PATJQ8NI35 1801 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 TRAV19A0A0A6YYK7 116 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 C2orf78A6NCI8 922 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 OTOL1A6NHN0 477 aaPredicted RBP11.15□□□□□ -0.62
SNF8-201ENST00000290330 F8VP50 259 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 IKBKBO14920 756 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 CALUO43852 315 aaPredicted RBP11.15□□□□□ -0.62
SNF8-201ENST00000290330 LILRB5O75023 590 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 USP17L7P0C7H9 530 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 TDGF1P13385 188 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 ANXA13P27216 316 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 CCR3P51677 355 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 CACNA2D1P54289 1103 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 CDH8P55286 799 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 USP46P62068 366 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 NOP14P78316 857 aaKnown RBP11.15□□□□□ -0.62
SNF8-201ENST00000290330 LRRC32Q14392 662 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 KCNB1Q14721 858 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 PON2Q15165 354 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 NFIL3Q16649 462 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 ZNF699Q32M78 642 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 DGKKQ5KSL6 1271 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 C1orf220Q5T0J3 134 aa11.15□□□□□ -0.62
SNF8-201ENST00000290330 CEP135Q66GS9 1140 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms