RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TRIM11Q96F44 468 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 PLVAPQ9BX97 442 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 MTRRQ9UBK8 725 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 PAXBP1Q9Y5B6 917 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 BACE2Q9Y5Z0 518 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 FAM200BP0CF97 657 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 MYBL1P10243 752 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 NPR3P17342 541 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 GLUD2P49448 558 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 CDR1P51861 262 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 PDCLQ13371 301 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 PSMD5Q16401 504 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 NFE2Q16621 373 aaPredicted RBP19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 RSPO2Q6UXX9 243 aaPredicted RBP19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 C4orf50Q6ZRC1 276 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 MMS22LQ6ZRQ5 1243 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 FAM35AQ86V20 835 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 C11orf70Q9BRQ4 267 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 PCDHA11Q9Y5I1 949 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 MACROD2A1Z1Q3 448 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 CALB1P05937 261 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 CTNNB1P35222 781 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 PTPN20Q4JDL3 420 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 C2CD6Q53TS8 623 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 PMF1Q6P1K2 205 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 GPR65Q8IYL9 337 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 SLC35F6Q8N357 371 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 MSANTD4Q8NCY6 345 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 FBXO22Q8NEZ5 403 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 ZNF653Q96CK0 615 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 SMARCD1Q96GM5 515 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 CPXM1Q96SM3 734 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 KRT82Q9NSB4 513 aa19.98■□□□□ 0.79
PDLIM3-202ENST00000284770 A0A0A6YYK5 440 aaPredicted RBP19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 TULP2O00295 520 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 C2CD2LO14523 706 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 XPO1O14980 1071 aaKnown RBP19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 AP1G2O75843 785 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 CYP1A2P05177 515 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 URODP06132 367 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 BMP8BP34820 402 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 PLA2G4AP47712 749 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 RGS19P49795 217 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 SMARCB1Q12824 385 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 GPR17Q13304 367 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 SLC8B1Q6J4K2 584 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 CLEC20AQ6ZU45 233 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 SPATA2LQ8IUW3 424 aaPredicted RBP19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 RNF10Q8N5U6 811 aaKnown RBP19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 ARHGEF26Q96DR7 871 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 SLC4A5Q9BY07 1137 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 ST7Q9NRC1 585 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 CNOT8Q9UFF9 292 aaKnown RBP19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 CDY1Q9Y6F8 540 aa19.97■□□□□ 0.79
PDLIM3-202ENST00000284770 NCANO14594 1321 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 C5orf67F2Z3F1 127 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 BEST1O76090 585 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 CA3P07451 260 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 BDNFP23560 247 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 RRM1P23921 792 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 GABRB2P47870 512 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 CFAP221Q4G0U5 840 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 LIN9Q5TKA1 542 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 RFFLQ8WZ73 363 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 C18orf8Q96DM3 657 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 FUBP3Q96I24 572 aaKnown RBP eCLIP19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 C17orf80Q9BSJ5 609 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 CSNK1G1Q9HCP0 422 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 AVENQ9NQS1 362 aaPredicted RBP19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 STRIP2Q9ULQ0 834 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 LZTS1Q9Y250 596 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 CAPN6Q9Y6Q1 641 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 CEP290O15078 2479 aa19.96■□□□□ 0.79
PDLIM3-202ENST00000284770 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 ARHGEF15O94989 841 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 CPB1P15086 417 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 RPL34P49207 117 aaKnown RBP19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 ARPP19P56211 112 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 SNX16P57768 344 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 TCEAL1Q15170 157 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 TMEM110Q86TL2 294 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 SLC35G2Q8TBE7 412 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 HSFY1Q96LI6 401 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 SMOQ99835 787 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 CLSTN3Q9BQT9 956 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 RHOBTB2Q9BYZ6 727 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 ZBP1Q9H171 429 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 SYNCQ9H7C4 482 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 CYLDQ9NQC7 956 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 MRPL17Q9NRX2 175 aaKnown RBP19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 ATMINO43313 823 aaPredicted RBP19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 MOCS3O95396 460 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 ERBB2P04626 1255 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 RB1P06400 928 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 CTSAP10619 480 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 CASQ1P31415 396 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 RGS7P49802 495 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 CACNA2D1P54289 1103 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 MAP3K7CLP57077 242 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms