RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 RHOAP61586 193 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 NAA20P61599 178 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 GUCY1A3Q02108 690 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 ZRANB3Q5FWF4 1079 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CDC73Q6P1J9 531 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 LRIG3Q6UXM1 1119 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 TBC1D10CQ8IV04 446 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CLEC4FQ8N1N0 589 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 PACSIN1Q9BY11 444 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 DDX47Q9H0S4 455 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 ALDH8A1Q9H2A2 487 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CYP39A1Q9NYL5 469 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 ATP6V1HQ9UI12 483 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 REREQ9P2R6 1566 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 BIRC5O15392 142 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 NCAM1P13591 858 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CHRM3P20309 590 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CYP2B6P20813 491 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 PGM1P36871 562 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 LHX1P48742 406 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 THOP1P52888 689 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CYTH1Q15438 398 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 ATAD3BQ5T9A4 648 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 RNF135Q8IUD6 432 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 FAM45AQ8TCE6 357 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 WNK4Q96J92 1243 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 C17orf80Q9BSJ5 609 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 TRIM8Q9BZR9 551 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 DCLK3Q9C098 648 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CYP4F11Q9HBI6 524 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 KRT84Q9NSB2 600 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 DBR1Q9UK59 544 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 GRID1Q9ULK0 1009 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 TULP4Q9NRJ4 1543 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 H0YC42 278 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 MYO1CO00159 1063 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 AKAP10O43572 662 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 PHF2O75151 1096 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 NDUFB10O96000 172 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CKBP12277 381 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 PSMC3P17980 439 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 TGM2P21980 687 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 DNAJB2P25686 324 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 SERPINB1P30740 379 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 ST13P50502 369 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CTXN3Q4LDR2 81 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 SBK1Q52WX2 424 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 SYCP2LQ5T4T6 812 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 C12orf60Q5U649 245 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 IPMKQ8NFU5 416 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 SYN2Q92777 582 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 THAP11Q96EK4 314 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 QRFPRQ96P65 431 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 MCEEQ96PE7 176 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 EPN3Q9H201 632 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 TRIT1Q9H3H1 467 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 C10orf88Q9H8K7 445 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 FAM49BQ9NUQ9 324 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 MTO1Q9Y2Z2 717 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 STON1Q9Y6Q2 735 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CROCC2H7BZ55 1655 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 LRRC14BA6NHZ5 514 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 WWP2O00308 870 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 POMCP01189 267 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CYP2A6P11509 494 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF200P98182 395 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 BAATQ14032 418 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 PLA2G4FQ68DD2 849 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CDK20Q8IZL9 346 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 TBC1D16Q8TBP0 767 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CELF1Q92879 486 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 ZBTB9Q96C00 473 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 CLMNQ96JQ2 1002 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 NFKBIZQ9BYH8 718 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 PHACTR1Q9C0D0 580 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 PRDM16Q9HAZ2 1276 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF70Q9UC06 446 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 AP3M1Q9Y2T2 418 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.22□□□□□ -1.73
SCN3A-201ENST00000283254 GVINP1Q7Z2Y8 2422 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 LAMC1P11047 1609 aa4.22□□□□□ -1.73
SCN3A-201ENST00000283254 MGAT4DA6NG13 374 aa4.21□□□□□ -1.73
SCN3A-201ENST00000283254 PDE2AO00408 941 aaPredicted RBP4.21□□□□□ -1.73
SCN3A-201ENST00000283254 ATP9BO43861 1147 aa4.21□□□□□ -1.73
SCN3A-201ENST00000283254 UPP2O95045 317 aa4.21□□□□□ -1.73
SCN3A-201ENST00000283254 SEC24BO95487 1268 aa4.21□□□□□ -1.73
SCN3A-201ENST00000283254 ASS1P00966 412 aaKnown RBP4.21□□□□□ -1.73
SCN3A-201ENST00000283254 RAG1P15918 1043 aa4.21□□□□□ -1.73
SCN3A-201ENST00000283254 ATP6V1C1P21283 382 aa4.21□□□□□ -1.73
SCN3A-201ENST00000283254 SOX6P35712 828 aa4.21□□□□□ -1.73
SCN3A-201ENST00000283254 SERPINB8P50452 374 aa4.21□□□□□ -1.73
SCN3A-201ENST00000283254 RAD23AP54725 363 aa4.21□□□□□ -1.73
SCN3A-201ENST00000283254 CACNB2Q08289 660 aaPredicted RBP4.21□□□□□ -1.73
SCN3A-201ENST00000283254 TBL3Q12788 808 aaKnown RBP4.21□□□□□ -1.73
SCN3A-201ENST00000283254 ANGPT1Q15389 498 aa4.21□□□□□ -1.73
SCN3A-201ENST00000283254 SLC18A3Q16572 532 aa4.21□□□□□ -1.73
SCN3A-201ENST00000283254 RIN3Q8TB24 985 aa4.21□□□□□ -1.73
SCN3A-201ENST00000283254 KCNB2Q92953 911 aa4.21□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF333Q96JL9 665 aa4.21□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF512BQ96KM6 892 aaPredicted RBP4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms