RNA–Protein interactions for RNA: ENST00000275575.11

PHTF2-202, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-202ENST00000275575 FMR1NBQ8N0W7 255 aaPredicted RBP3.62□□□□□ -1.83
PHTF2-202ENST00000275575 MCPH1Q8NEM0 835 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 PARD3BQ8TEW8 1205 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 CLIC6Q96NY7 704 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 DNAI2Q9GZS0 605 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 LINC00597Q9H2U6 94 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 CYP46A1Q9Y6A2 500 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 IGHV1OR15-9A0A0B4J2B8 117 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 HEPACAM2A8MVW5 462 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 OGTO15294 1046 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 NOBOXO60393 691 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 PLA2G4BP0C869 781 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 ITGA4P13612 1032 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 OR1D2P34982 312 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 SLC6A11P48066 632 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 EFNA5P52803 228 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 ZNF423Q2M1K9 1284 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 KCTD16Q68DU8 428 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 BEND5Q7L4P6 421 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 DNAJB7Q7Z6W7 309 aaPredicted RBP3.62□□□□□ -1.83
PHTF2-202ENST00000275575 TTC30AQ86WT1 665 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 BAP1Q92560 729 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 PCED1BQ96HM7 432 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 PSMB7Q99436 277 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 RBM12Q9NTZ6 932 aaKnown RBP3.62□□□□□ -1.83
PHTF2-202ENST00000275575 SEC63Q9UGP8 760 aaKnown RBP3.62□□□□□ -1.83
PHTF2-202ENST00000275575 ADAMTS1Q9UHI8 967 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 UBE4BO95155 1302 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 CCL16O15467 120 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 TSPAN3O60637 253 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 GLUD1P00367 558 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 ASS1P00966 412 aaKnown RBP3.62□□□□□ -1.83
PHTF2-202ENST00000275575 GJA1P17302 382 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 GABRG2P18507 467 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 CD72P21854 359 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 DRD3P35462 400 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 STK4Q13043 487 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 MSLNQ13421 630 aaPredicted RBP3.62□□□□□ -1.83
PHTF2-202ENST00000275575 NOLC1Q14978 699 aaKnown RBP eCLIP3.62□□□□□ -1.83
PHTF2-202ENST00000275575 NR1D2Q14995 579 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 CDKN3Q16667 212 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 MIIPQ5JXC2 388 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 MSANTD2Q6P1R3 559 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 CASC1Q6TDU7 716 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 CLEC20AQ6ZU45 233 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 CELF5Q8N6W0 485 aaKnown RBP3.62□□□□□ -1.83
PHTF2-202ENST00000275575 SLC4A11Q8NBS3 891 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 SLC35F5Q8WV83 523 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 PPM1EQ8WY54 764 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 FUBP3Q96I24 572 aaKnown RBP eCLIP3.62□□□□□ -1.83
PHTF2-202ENST00000275575 FUCA2Q9BTY2 467 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 ORC3Q9UBD5 711 aaPredicted RBP3.62□□□□□ -1.83
PHTF2-202ENST00000275575 ACSL6Q9UKU0 697 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 SIT1Q9Y3P8 196 aa3.62□□□□□ -1.83
PHTF2-202ENST00000275575 BECN2A8MW95 431 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 RHOBTB3O94955 611 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 LMNAP02545 664 aaKnown RBP3.61□□□□□ -1.83
PHTF2-202ENST00000275575 CASP1P29466 404 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 SLC6A4P31645 630 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 CREMQ03060 361 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 CYP24A1Q07973 514 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 TWF1Q12792 350 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 CRB2Q5IJ48 1285 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 ANKS3Q6ZW76 656 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 OTOP3Q7RTS5 596 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 LONP2Q86WA8 852 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 FAM71BQ8TC56 605 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 TTC17Q96AE7 1141 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 C22orf23Q9BZE7 217 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 ELOVL4Q9GZR5 314 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 SMG9Q9H0W8 520 aaKnown RBP3.61□□□□□ -1.83
PHTF2-202ENST00000275575 FAM124BQ9H5Z6 455 aaPredicted RBP3.61□□□□□ -1.83
PHTF2-202ENST00000275575 IGFLR1Q9H665 355 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 KIAA1024Q9UPX6 916 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.61□□□□□ -1.83
PHTF2-202ENST00000275575 CILPO75339 1184 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 MYCNP04198 464 aaPredicted RBP3.61□□□□□ -1.83
PHTF2-202ENST00000275575 RETP07949 1114 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 ZSCAN20P17040 1043 aaPredicted RBP3.61□□□□□ -1.83
PHTF2-202ENST00000275575 LONP1P36776 959 aaKnown RBP3.61□□□□□ -1.83
PHTF2-202ENST00000275575 RAD23BP54727 409 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 MCM6Q14566 821 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 GLRA4Q5JXX5 417 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 DGKKQ5KSL6 1271 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 TRIM68Q6AZZ1 485 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 CXorf57Q6NSI4 855 aaKnown RBP3.61□□□□□ -1.83
PHTF2-202ENST00000275575 EXOC8Q8IYI6 725 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 ARFGAP1Q8N6T3 406 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 DEPDC1BQ8WUY9 529 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 NELL2Q99435 816 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 NOL6Q9H6R4 1146 aaKnown RBP3.61□□□□□ -1.83
PHTF2-202ENST00000275575 AGPAT3Q9NRZ7 376 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 COMMD8Q9NX08 183 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 SMG5Q9UPR3 1016 aaKnown RBP3.61□□□□□ -1.83
PHTF2-202ENST00000275575 DNAH1Q9P2D7 4330 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 SRRM3A6NNA2 597 aaPredicted RBP3.61□□□□□ -1.83
PHTF2-202ENST00000275575 PPP1R3GB7ZBB8 358 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 SGK1O00141 431 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 SLC16A4O15374 487 aa3.61□□□□□ -1.83
PHTF2-202ENST00000275575 COCHO43405 550 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms