RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 MUM1Q2TAK8 710 aa17.71■□□□□ 0.43
RTN1-201ENST00000267484 PTPN20Q4JDL3 420 aa17.71■□□□□ 0.43
RTN1-201ENST00000267484 RAB6CQ53S08 254 aa17.71■□□□□ 0.43
RTN1-201ENST00000267484 TMEM35BQ8NCS4 154 aa17.71■□□□□ 0.43
RTN1-201ENST00000267484 RAB6CQ9H0N0 254 aa17.71■□□□□ 0.43
RTN1-201ENST00000267484 ZNF395Q9H8N7 513 aaPredicted RBP17.71■□□□□ 0.43
RTN1-201ENST00000267484 KCNK13Q9HB14 408 aa17.71■□□□□ 0.43
RTN1-201ENST00000267484 CNTN6Q9UQ52 1028 aa17.71■□□□□ 0.43
RTN1-201ENST00000267484 A6NHS1 94 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 PIK3R2O00459 728 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 MT-ND3P03897 115 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 PYGBP11216 843 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 PHBP35232 272 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 ELK3P41970 407 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 ARFIP2P53365 341 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 CCDC6Q16204 474 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 KBTBD12Q3ZCT8 623 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 ACSBG2Q5FVE4 666 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 NRG4Q8WWG1 115 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 DNAJC9Q8WXX5 260 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 LPAR1Q92633 364 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 GPRASP2Q96D09 838 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 SYT15Q9BQS2 421 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 MECRQ9BV79 373 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 NMRK1Q9NWW6 199 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 NXF1Q9UBU9 619 aaKnown RBP17.7■□□□□ 0.42
RTN1-201ENST00000267484 STYXL1Q9Y6J8 313 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 COL4A5P29400 1685 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 FAM237BA0A1B0GVD1 139 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 MMRN1Q13201 1228 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 PPP1R15BQ5SWA1 713 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 ENDOVQ8N8Q3 282 aaKnown RBP17.7■□□□□ 0.42
RTN1-201ENST00000267484 CALN1Q9BXU9 219 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 TRIM55Q9BYV6 548 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 GYG2O15488 501 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 STAM2O75886 525 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 LUC7L3O95232 432 aaKnown RBP17.7■□□□□ 0.42
RTN1-201ENST00000267484 ATP6V1C1P21283 382 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 TGFB2P61812 414 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 TFAMQ00059 246 aaKnown RBP17.7■□□□□ 0.42
RTN1-201ENST00000267484 PTK7Q13308 1070 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 WASHC2DQ5SRD0 308 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 ALYREFQ86V81 257 aaKnown RBP17.7■□□□□ 0.42
RTN1-201ENST00000267484 RFX6Q8HWS3 928 aa17.7■□□□□ 0.42
RTN1-201ENST00000267484 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.7■□□□□ 0.42
RTN1-201ENST00000267484 GSC2O15499 205 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 ASS1P00966 412 aaKnown RBP17.69■□□□□ 0.42
RTN1-201ENST00000267484 RTP1P59025 263 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 YWHAGP61981 247 aaKnown RBP eCLIP17.69■□□□□ 0.42
RTN1-201ENST00000267484 SLC25A11Q02978 314 aaKnown RBP17.69■□□□□ 0.42
RTN1-201ENST00000267484 GRIK3Q13003 919 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 PIGHQ14442 188 aaPredicted RBP17.69■□□□□ 0.42
RTN1-201ENST00000267484 XKR3Q5GH77 459 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 LRRC38Q5VT99 294 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 CDHR3Q6ZTQ4 885 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 RDM1Q8NG50 284 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 FBXO27Q8NI29 283 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 POLIQ9UNA4 740 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 TRAFD1O14545 582 aaPredicted RBP17.69■□□□□ 0.42
RTN1-201ENST00000267484 KRT3P12035 628 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 YY1P25490 414 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 FAXCQ5TGI0 409 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 PRPF39Q86UA1 669 aaKnown RBP17.69■□□□□ 0.42
RTN1-201ENST00000267484 PTCD3Q96EY7 689 aaKnown RBP17.69■□□□□ 0.42
RTN1-201ENST00000267484 PORCNQ9H237 461 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 CCDC195A0A1B0GUA6 201 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 KBTBD13C9JR72 458 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 KDELR1P24390 212 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 CDH8P55286 799 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 PDIK1LQ8N165 341 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 UBR7Q8N806 425 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 BTBD10Q9BSF8 475 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 DHRS4Q9BTZ2 278 aa17.69■□□□□ 0.42
RTN1-201ENST00000267484 TCRBV9S1A1TA0A576 114 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 MYL2P10916 166 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 CHRM1P11229 460 aaPredicted RBP17.68■□□□□ 0.42
RTN1-201ENST00000267484 EIF3EP60228 445 aaKnown RBP17.68■□□□□ 0.42
RTN1-201ENST00000267484 SH3PXD2AQ5TCZ1 1133 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 THEMIS2Q5TEJ8 643 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 DPH6Q7L8W6 267 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 FAM83AQ86UY5 434 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 VPS52Q8N1B4 723 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 CFAP36Q96G28 342 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 TRIM56Q9BRZ2 755 aaKnown RBP17.68■□□□□ 0.42
RTN1-201ENST00000267484 DCLRE1BQ9H816 532 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 DDX56Q9NY93 547 aaKnown RBP17.68■□□□□ 0.42
RTN1-201ENST00000267484 SUPT20HL2P0C7V6 817 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 NBPF20Q3BBV1 942 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 SUPT20HL1Q3ZLR7 823 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 PRAMEF18Q5VWM3 479 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 KCTD6Q8NC69 237 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 ARMC2Q8NEN0 867 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 NSUN6Q8TEA1 469 aaKnown RBP17.68■□□□□ 0.42
RTN1-201ENST00000267484 MCUR1Q96AQ8 359 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 TLE6Q9H808 572 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 TAS2R1Q9NYW7 299 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 MARCOQ9UEW3 520 aaPredicted RBP17.68■□□□□ 0.42
RTN1-201ENST00000267484 LNPEPQ9UIQ6 1025 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 ADGRA2Q96PE1 1338 aa17.68■□□□□ 0.42
RTN1-201ENST00000267484 CAPN9O14815 690 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms