RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 CISHQ9NSE2 258 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 STOML1Q9UBI4 398 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 LRRC37AA6NMS7 1700 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 C2CD2LO14523 706 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 LGR5O75473 907 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 EDN1P05305 212 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 CALB1P05937 261 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 IL1R2P27930 398 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 PTP4A2Q12974 167 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 OASLQ15646 514 aaKnown RBP12.98□□□□□ -0.33
CHMP3-201ENST00000263856 LRRC36Q1X8D7 754 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 SLC45A4Q5BKX6 768 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 ACSBG2Q5FVE4 666 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 RNF220Q5VTB9 566 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 SCYL2Q6P3W7 929 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 C4orf50Q6ZRC1 276 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 KRT27Q7Z3Y8 459 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 FBXO41Q8TF61 875 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 WDR60Q8WVS4 1066 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 SCG3Q8WXD2 468 aaKnown RBP12.98□□□□□ -0.33
CHMP3-201ENST00000263856 SLC7A3Q8WY07 619 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 SERAC1Q96JX3 654 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 CLPTM1LQ96KA5 538 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 DDX50Q9BQ39 737 aaKnown RBP12.98□□□□□ -0.33
CHMP3-201ENST00000263856 SYT15Q9BQS2 421 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 PIDD1Q9HB75 910 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 SLC24A2Q9UI40 661 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 CORO1CQ9ULV4 474 aaPredicted RBP12.98□□□□□ -0.33
CHMP3-201ENST00000263856 SHOC2Q9UQ13 582 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 HEY1Q9Y5J3 304 aa12.98□□□□□ -0.33
CHMP3-201ENST00000263856 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.98□□□□□ -0.33
CHMP3-201ENST00000263856 ATP6V1C1P21283 382 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 TBXAS1P24557 533 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-201ENST00000263856 CDH8P55286 799 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 TMPRSS15P98073 1019 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 PRKG1Q13976 671 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 KLHL38Q2WGJ6 581 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 NIPA1Q7RTP0 329 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 IGDCC3Q8IVU1 814 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 SPATA18Q8TC71 538 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 TFAP2BQ92481 460 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 NSL1Q96IY1 281 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 TRIM56Q9BRZ2 755 aaKnown RBP12.97□□□□□ -0.33
CHMP3-201ENST00000263856 BTBD10Q9BSF8 475 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 SHCBP1LQ9BZQ2 653 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 DCLRE1BQ9H816 532 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 QTRT2Q9H974 415 aaKnown RBP12.97□□□□□ -0.33
CHMP3-201ENST00000263856 KANSL3Q9P2N6 904 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 POLIQ9UNA4 740 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 WASF2Q9Y6W5 498 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 LOXHD1Q8IVV2 1947 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 PPP1R12AO14974 1030 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-201ENST00000263856 WDR46O15213 610 aaKnown RBP12.97□□□□□ -0.33
CHMP3-201ENST00000263856 MAGEB2O15479 319 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 WFS1O76024 890 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 PGM1P36871 562 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 ALDH18A1P54886 795 aaKnown RBP12.97□□□□□ -0.33
CHMP3-201ENST00000263856 SARNPP82979 210 aaKnown RBP12.97□□□□□ -0.33
CHMP3-201ENST00000263856 EFHC2Q5JST6 749 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 C15orf39Q6ZRI6 1047 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 ZCCHC23Q6ZST2 131 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 ARID3BQ8IVW6 561 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-201ENST00000263856 PPFIBP2Q8ND30 876 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-201ENST00000263856 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 FAF2Q96CS3 445 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 FOXP3Q9BZS1 431 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 ARHGAP28Q9P2N2 729 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 MAD1L1Q9Y6D9 718 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 B2RBV5 119 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 TRIM49D1C9J1S8 452 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 COPEO14579 308 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 MCF2LO15068 1137 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 GNAT1P11488 350 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 HADHQ16836 314 aaKnown RBP12.97□□□□□ -0.33
CHMP3-201ENST00000263856 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 DENND1BQ6P3S1 775 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 HIPK4Q8NE63 616 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 PPP1R14CQ8TAE6 165 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 ZNF483Q8TF39 744 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-201ENST00000263856 ACAP3Q96P50 834 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 NMUR2Q9GZQ4 415 aa12.97□□□□□ -0.33
CHMP3-201ENST00000263856 FCHO1O14526 889 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 ZCCHC18P0CG32 403 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 ZNF699Q32M78 642 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 TDRPQ86YL5 185 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 TEKT4Q8WW24 435 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 CGRRF1Q99675 332 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 WDR83Q9BRX9 315 aaKnown RBP12.96□□□□□ -0.33
CHMP3-201ENST00000263856 ZNRF3Q9ULT6 936 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 E2F8A0AVK6 867 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 MEI4A8MW99 385 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 I3L4J1 428 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 CYB561D2O14569 222 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 GSC2O15499 205 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 VHLP40337 213 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 FKBP1AP62942 108 aaKnown RBP12.96□□□□□ -0.33
CHMP3-201ENST00000263856 WASHC2DQ5SRD0 308 aa12.96□□□□□ -0.33
CHMP3-201ENST00000263856 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHMP3-201ENST00000263856 THTPAQ9BU02 230 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms