RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 ARHGEF9O43307 516 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 KRT33AO76009 404 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 NR1D1P20393 614 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 PSEN2P49810 448 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 CLEC16AQ2KHT3 1053 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 FSCBQ5H9T9 825 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 IZUMO3Q5VZ72 239 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 TLE6Q9H808 572 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 VTI1BQ9UEU0 232 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 PADI4Q9UM07 663 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.48■□□□□ 0.23
SHANK3-201ENST00000262795 MMGT1Q8N4V1 131 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 PKD2L2Q9NZM6 624 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 CTIFO43310 598 aaKnown RBP16.48■□□□□ 0.23
SHANK3-201ENST00000262795 EXTL3O43909 919 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 ZNF484Q5JVG2 852 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 TRIM72Q6ZMU5 477 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 TMA16Q96EY4 203 aaKnown RBP16.48■□□□□ 0.23
SHANK3-201ENST00000262795 JMJD4Q9H9V9 463 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.48■□□□□ 0.23
SHANK3-201ENST00000262795 NYAP2Q9P242 653 aa16.48■□□□□ 0.23
SHANK3-201ENST00000262795 TRMT6Q9UJA5 497 aaKnown RBP16.48■□□□□ 0.23
SHANK3-201ENST00000262795 MSH4O15457 936 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 LRRC14Q15048 493 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 FUT11Q495W5 492 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 C2CD6Q53TS8 623 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 FAXCQ5TGI0 409 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 C1orf167Q5SNV9 1468 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 PNPLA4P41247 253 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 RPS7P62081 194 aaKnown RBP16.47■□□□□ 0.23
SHANK3-201ENST00000262795 NT5MQ9NPB1 228 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 USE1Q9NZ43 259 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 NFIBO00712 420 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 PLEKHM3Q6ZWE6 761 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 FAM205CA6NFA0 338 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 H0YC42 278 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 PRKAR2AP13861 404 aaKnown RBP16.47■□□□□ 0.23
SHANK3-201ENST00000262795 CCR4P51679 360 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 POU4F1Q01851 419 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 DENND5BQ6ZUT9 1274 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 SYT2Q8N9I0 419 aaPredicted RBP16.47■□□□□ 0.23
SHANK3-201ENST00000262795 KCTD10Q9H3F6 313 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.47■□□□□ 0.233e-6■■■■□ 20.6
SHANK3-201ENST00000262795 ZNHIT2Q9UHR6 403 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 TNFSF13BQ9Y275 285 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 YWHAQP27348 245 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 YWHAZP63104 245 aaKnown RBP16.47■□□□□ 0.23
SHANK3-201ENST00000262795 C16orf72Q14CZ0 275 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 GALNTL6Q49A17 601 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 EFHC1Q5JVL4 640 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 SGF29Q96ES7 293 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 GEMIN8Q9NWZ8 242 aaKnown RBP16.47■□□□□ 0.23
SHANK3-201ENST00000262795 SMARCAL1Q9NZC9 954 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 KLHL3Q9UH77 587 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 ADAM21Q9UKJ8 722 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 PLAAQ9Y263 795 aa16.47■□□□□ 0.23
SHANK3-201ENST00000262795 KPNA6O60684 536 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 CXCL14O95715 111 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 WASP42768 502 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 TAP1Q03518 808 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 XRCC4Q13426 336 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 SPARCL1Q14515 664 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 KLHL38Q2WGJ6 581 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 OVOS1Q6IE37 1185 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 PXMP2Q9NR77 195 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 UBP1Q9NZI7 540 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 SLC9A1P19634 815 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 NRBF2Q96F24 287 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 UNKQ9C0B0 810 aaKnown RBP16.46■□□□□ 0.23
SHANK3-201ENST00000262795 F8W810 466 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 ANGPT2O15123 496 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 RASA1P20936 1047 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 NOGQ13253 232 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 PPP2R2DQ66LE6 453 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 ZNF34Q8IZ26 560 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 TADA3O75528 432 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 ABCB1P08183 1280 aaPredicted RBP16.46■□□□□ 0.23
SHANK3-201ENST00000262795 CENPTQ96BT3 561 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 PITPNM3Q9BZ71 974 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 RNF112Q9ULX5 631 aa16.46■□□□□ 0.23
SHANK3-201ENST00000262795 CCL16O15467 120 aa16.46■□□□□ 0.22
SHANK3-201ENST00000262795 STIP1P31948 543 aaKnown RBP16.46■□□□□ 0.22
SHANK3-201ENST00000262795 DDX28Q9NUL7 540 aaKnown RBP16.46■□□□□ 0.22
SHANK3-201ENST00000262795 NRKQ7Z2Y5 1582 aa16.45■□□□□ 0.22
SHANK3-201ENST00000262795 A0A087X0T9 212 aa16.45■□□□□ 0.22
SHANK3-201ENST00000262795 PSMD3O43242 534 aa16.45■□□□□ 0.22
SHANK3-201ENST00000262795 INSRRP14616 1297 aa16.45■□□□□ 0.22
SHANK3-201ENST00000262795 FNTAP49354 379 aa16.45■□□□□ 0.22
SHANK3-201ENST00000262795 NCKAP1LP55160 1127 aa16.45■□□□□ 0.22
SHANK3-201ENST00000262795 RESTQ13127 1097 aa16.45■□□□□ 0.22
SHANK3-201ENST00000262795 UBXN2BQ14CS0 331 aa16.45■□□□□ 0.22
SHANK3-201ENST00000262795 LUZP2Q86TE4 346 aa16.45■□□□□ 0.22
SHANK3-201ENST00000262795 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.45■□□□□ 0.221e-8■□□□□ 9
SHANK3-201ENST00000262795 USP20Q9Y2K6 914 aa16.45■□□□□ 0.22
SHANK3-201ENST00000262795 CPSF4O95639 269 aaKnown RBP16.45■□□□□ 0.22
SHANK3-201ENST00000262795 NME5P56597 212 aa16.45■□□□□ 0.22
SHANK3-201ENST00000262795 FBXL19Q6PCT2 694 aa16.45■□□□□ 0.22
SHANK3-201ENST00000262795 CCDC137Q6PK04 289 aaKnown RBP16.45■□□□□ 0.22
SHANK3-201ENST00000262795 LAYNQ6UX15 382 aa16.45■□□□□ 0.22
SHANK3-201ENST00000262795 ENOSF1Q7L5Y1 443 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms