RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 OVOS1Q6IE37 1185 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 TMEM110Q86TL2 294 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 LRRC43Q8N309 656 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 MYCBPAPQ8TBZ2 947 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 RTP3Q9BQQ7 232 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 MED10Q9BTT4 135 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 COLEC11Q9BWP8 271 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 DUSP16Q9BY84 665 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 CARD9Q9H257 536 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 PRG3Q9Y2Y8 225 aaPredicted RBP13.72□□□□□ -0.21
VAMP7-201ENST00000262640 TULP2O00295 520 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 PDE2AO00408 941 aaPredicted RBP13.72□□□□□ -0.21
VAMP7-201ENST00000262640 XPO1O14980 1071 aaKnown RBP13.72□□□□□ -0.21
VAMP7-201ENST00000262640 TADA2AO75478 443 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 ACADSBP45954 432 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 PLA2G4AP47712 749 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 RPL34P49207 117 aaKnown RBP13.72□□□□□ -0.21
VAMP7-201ENST00000262640 RGS7P49802 495 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 ITIH3Q06033 890 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 MFSD5Q6N075 450 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.72□□□□□ -0.21
VAMP7-201ENST00000262640 ZDHHC17Q8IUH5 632 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 TMEM199Q8N511 208 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 UBXN4Q92575 508 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 HSFY1Q96LI6 401 aa13.72□□□□□ -0.21
VAMP7-201ENST00000262640 NRP1O14786 923 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 CEP104O60308 925 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 EFCAB14O75071 495 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 ALDH2P05091 517 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 NPR3P17342 541 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 PIGHQ14442 188 aaPredicted RBP13.71□□□□□ -0.21
VAMP7-201ENST00000262640 INTS6LQ5JSJ4 861 aaKnown RBP13.71□□□□□ -0.21
VAMP7-201ENST00000262640 OR6B2Q6IFH4 312 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 RSRC2Q7L4I2 434 aaKnown RBP13.71□□□□□ -0.21
VAMP7-201ENST00000262640 ACTRT1Q8TDG2 376 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 FNIP1Q8TF40 1166 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 B3GNT5Q9BYG0 378 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 ADAM28Q9UKQ2 775 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 PCDHA3Q9Y5H8 950 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 TSC2P49815 1807 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 SYN3O14994 580 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 FAM200BP0CF97 657 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 ITGB8P26012 769 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 TSPY1Q01534 308 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 YWHAHQ04917 246 aaPredicted RBP13.71□□□□□ -0.21
VAMP7-201ENST00000262640 FAM102AQ5T9C2 384 aaPredicted RBP13.71□□□□□ -0.21
VAMP7-201ENST00000262640 FAM183BPQ6ZVS7 135 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 PAQR9Q6ZVX9 377 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 UBE2Q1Q7Z7E8 422 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 CPNE8Q86YQ8 564 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 RASGEF1CQ8N431 466 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 NIPA2Q8N8Q9 360 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 KRT35Q92764 455 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 MS4A14Q96JA4 679 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 METTL5Q9NRN9 209 aaKnown RBP13.71□□□□□ -0.21
VAMP7-201ENST00000262640 FAN1Q9Y2M0 1017 aa13.71□□□□□ -0.21
VAMP7-201ENST00000262640 MICAL3Q7RTP6 2002 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 MYBPHLA2RUH7 354 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 CLDN5O00501 218 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 DYNC1I1O14576 645 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 AMHP03971 560 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 CSF2RAP15509 400 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 RFC1P35251 1148 aaPredicted RBP13.7□□□□□ -0.22
VAMP7-201ENST00000262640 SLC11A1P49279 550 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 PEX5P50542 639 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 MAPRE1Q15691 268 aaKnown RBP13.7□□□□□ -0.22
VAMP7-201ENST00000262640 CLUL1Q15846 466 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 CCDC142Q17RM4 750 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 FAM171BQ6P995 826 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 FAM35AQ86V20 835 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 ALG3Q92685 438 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 PCED1BQ96HM7 432 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 KRT82Q9NSB4 513 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 TTC7AQ9ULT0 858 aaPredicted RBP13.7□□□□□ -0.22
VAMP7-201ENST00000262640 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.7□□□□□ -0.22
VAMP7-201ENST00000262640 PGRMC1O00264 195 aaKnown RBP13.7□□□□□ -0.22
VAMP7-201ENST00000262640 UPP2O95045 317 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 SCNN1AP37088 669 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 RWDD2BP57060 319 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 ELAVL2Q12926 359 aaKnown RBP13.7□□□□□ -0.22
VAMP7-201ENST00000262640 TEX35Q5T0J7 233 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 DCAF12L1Q5VU92 463 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 JOSD2Q8TAC2 188 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 PKMYT1Q99640 499 aa13.7□□□□□ -0.22
VAMP7-201ENST00000262640 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.7□□□□□ -0.224e-7■□□□□ 8.7
VAMP7-201ENST00000262640 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.7□□□□□ -0.22
VAMP7-201ENST00000262640 V9GYY5 206 aaPredicted RBP13.7□□□□□ -0.22
VAMP7-201ENST00000262640 PIK3R2O00459 728 aa13.69□□□□□ -0.22
VAMP7-201ENST00000262640 PSTPIP1O43586 416 aa13.69□□□□□ -0.22
VAMP7-201ENST00000262640 DGKIO75912 1065 aa13.69□□□□□ -0.22
VAMP7-201ENST00000262640 OAZ2O95190 189 aa13.69□□□□□ -0.22
VAMP7-201ENST00000262640 MARCKSL1P49006 195 aa13.69□□□□□ -0.22
VAMP7-201ENST00000262640 SLC6A3Q01959 620 aa13.69□□□□□ -0.22
VAMP7-201ENST00000262640 OGDHQ02218 1023 aa13.69□□□□□ -0.22
VAMP7-201ENST00000262640 ZNF252P-AS1Q0IIN9 211 aa13.69□□□□□ -0.22
VAMP7-201ENST00000262640 ERCC6LQ2NKX8 1250 aa13.69□□□□□ -0.22
VAMP7-201ENST00000262640 OLFML1Q6UWY5 402 aa13.69□□□□□ -0.22
VAMP7-201ENST00000262640 CLEC20AQ6ZU45 233 aa13.69□□□□□ -0.22
VAMP7-201ENST00000262640 RHOT1Q8IXI2 618 aa13.69□□□□□ -0.22
VAMP7-201ENST00000262640 SPATA4Q8NEY3 305 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms