RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 PPM1HQ9ULR3 514 aa16.66■□□□□ 0.26
LMNB1-201ENST00000261366 G3BP2Q9UN86 482 aaKnown RBP16.66■□□□□ 0.26
LMNB1-201ENST00000261366 hCG_1818297A0A087WSY0 165 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 INHBAP08476 426 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 BRD2P25440 801 aaKnown RBP16.65■□□□□ 0.26
LMNB1-201ENST00000261366 ELK3P41970 407 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 TMPRSS15P98073 1019 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 BMPR2Q13873 1038 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 TFDP3Q5H9I0 405 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 ADGRD1Q6QNK2 874 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 FAM43BQ6ZT52 329 aaPredicted RBP16.65■□□□□ 0.26
LMNB1-201ENST00000261366 UNC45BQ8IWX7 931 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 EFCAB3Q8N7B9 438 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 GATA6Q92908 595 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 CCDC124Q96CT7 223 aaKnown RBP16.65■□□□□ 0.26
LMNB1-201ENST00000261366 GORASP1Q9BQQ3 440 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 IP6K2Q9UHH9 426 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 SHOC2Q9UQ13 582 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 MTO1Q9Y2Z2 717 aaKnown RBP16.65■□□□□ 0.26
LMNB1-201ENST00000261366 LRRC37AA6NMS7 1700 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 ANKRD33BA6NCL7 494 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 ARHGAP42A6NI28 874 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 STK10O94804 968 aaKnown RBP16.65■□□□□ 0.26
LMNB1-201ENST00000261366 TOP3BO95985 862 aaKnown RBP16.65■□□□□ 0.26
LMNB1-201ENST00000261366 CCNE2O96020 404 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 ANPEPP15144 967 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 GTF2H1P32780 548 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 RPL22P35268 128 aaKnown RBP16.65■□□□□ 0.26
LMNB1-201ENST00000261366 SLC18A1P54219 525 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 PTP4A2Q12974 167 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 CUL3Q13618 768 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 PLEKHA7Q6IQ23 1121 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 USP37Q86T82 979 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 PRPF39Q86UA1 669 aaKnown RBP16.65■□□□□ 0.26
LMNB1-201ENST00000261366 B4GALNT2Q8NHY0 566 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 CCDC110Q8TBZ0 833 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 PYDC1Q8WXC3 89 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 PANX3Q96QZ0 392 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 VPS11Q9H270 941 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 ACSS3Q9H6R3 686 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 ARHGEF4Q9NR80 690 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 SCINQ9Y6U3 715 aa16.65■□□□□ 0.26
LMNB1-201ENST00000261366 DCAF8L1A6NGE4 600 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 OPHN1O60890 802 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 MAPTP10636 758 aaKnown RBP16.64■□□□□ 0.25
LMNB1-201ENST00000261366 LIG4P49917 911 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 RTP1P59025 263 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 MCL1Q07820 350 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 CUL2Q13617 745 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 UBAP2LQ14157 1087 aaKnown RBP16.64■□□□□ 0.25
LMNB1-201ENST00000261366 FAXCQ5TGI0 409 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 ZNF772Q68DY9 489 aaPredicted RBP16.64■□□□□ 0.25
LMNB1-201ENST00000261366 SCARA5Q6ZMJ2 495 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 PPM1NQ8N819 430 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 TMC2Q8TDI7 906 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 PCDH9Q9HC56 1237 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 TJP2Q9UDY2 1190 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 NUB1Q9Y5A7 615 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 KBTBD13C9JR72 458 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 SORBS2O94875 1100 aaKnown RBP16.64■□□□□ 0.25
LMNB1-201ENST00000261366 PRKD1Q15139 912 aaPredicted RBP16.64■□□□□ 0.25
LMNB1-201ENST00000261366 CMPK2Q5EBM0 449 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 SCUBE1Q8IWY4 988 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 PPIL6Q8IXY8 311 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 PDIK1LQ8N165 341 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 POU5F2Q8N7G0 328 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 MZB1Q8WU39 189 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 TAAR1Q96RJ0 339 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 TRIM56Q9BRZ2 755 aaKnown RBP16.64■□□□□ 0.25
LMNB1-201ENST00000261366 NDE1Q9NXR1 346 aa16.64■□□□□ 0.25
LMNB1-201ENST00000261366 TM9SF1O15321 606 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 HNRNPCL1O60812 293 aaKnown RBP16.63■□□□□ 0.25
LMNB1-201ENST00000261366 VNN1O95497 513 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 EPHB1P54762 984 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 BPIFB4P59827 614 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 TRAF1Q13077 416 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 KLHL38Q2WGJ6 581 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 RAPH1Q70E73 1250 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 EMC1Q8N766 993 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 SMC1BQ8NDV3 1235 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 GSTCDQ8NEC7 633 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 CHURC1Q8WUH1 139 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 IDI2Q9BXS1 227 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 UBE2OQ9C0C9 1292 aaKnown RBP16.63■□□□□ 0.25
LMNB1-201ENST00000261366 TRIM49D1C9J1S8 452 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 TXNDC9O14530 226 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 CIB2O75838 187 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 ACO1P21399 889 aaKnown RBP16.63■□□□□ 0.25
LMNB1-201ENST00000261366 CDKN2BP42772 138 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 AQP5P55064 265 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 DSG1Q02413 1049 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 OR5B17Q8NGF7 314 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 ZNF398Q8TD17 642 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 ZNF606Q8WXB4 792 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 EBF3Q9H4W6 596 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 ZNF212Q9UDV6 495 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 SLC7A8Q9UHI5 535 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 ZNRF3Q9ULT6 936 aa16.63■□□□□ 0.25
LMNB1-201ENST00000261366 GREB1LQ9C091 1923 aaPredicted RBP16.63■□□□□ 0.25
LMNB1-201ENST00000261366 TCRBV9S1A1TA0A576 114 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms