RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 SIK2Q9H0K1 926 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 SLC39A10Q9ULF5 831 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 PCDHB2Q9Y5E7 798 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 COPG1Q9Y678 874 aaKnown RBP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 ZHX2Q9Y6X8 837 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 MAP3K6O95382 1288 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 HLA-DRAP01903 254 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 SETD3Q86TU7 594 aaPredicted RBP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 MASTLQ96GX5 879 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 DUSP9Q99956 384 aaKnown RBP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 CAMTA2O94983 1202 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 THRAP10827 490 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 ITPRIPL1Q6GPH6 555 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 C11orf74Q86VG3 221 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 ZCCHC7Q8N3Z6 543 aaKnown RBP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 DAGLBQ8NCG7 672 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 PPHLN1Q8NEY8 458 aaKnown RBP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 SCFD1Q8WVM8 642 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 ATXN2LQ8WWM7 1075 aaKnown RBP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 NEUROG2Q9H2A3 272 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 CTNNAL1Q9UBT7 734 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 H0YC42 278 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 TBX3O15119 743 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 RPS6KA5O75582 802 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 AKAP3O75969 853 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 TNFAIP8O95379 198 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 RBP3P10745 1247 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 PIGHQ14442 188 aaPredicted RBP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 MAPRE1Q15691 268 aaKnown RBP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 ACAD10Q6JQN1 1059 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 FBXO33Q7Z6M2 555 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 RNF149Q8NC42 400 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 RMND5BQ96G75 393 aaPredicted RBP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 REXO4Q9GZR2 422 aaKnown RBP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 SEMA6AQ9H2E6 1030 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 PARVBQ9HBI1 364 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 GDF3Q9NR23 364 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 SLC5A4Q9NY91 659 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 FAM8A1Q9UBU6 413 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 PRR12Q9ULL5 1215 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 CORO1CQ9ULV4 474 aaPredicted RBP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 EME2A4GXA9 379 aaPredicted RBP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 EFHC2Q5JST6 749 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 CCDC149Q6ZUS6 474 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 PTPRN2Q92932 1015 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 TATDN2Q93075 761 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 MAML3Q96JK9 1138 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 TEX12Q9BXU0 123 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 PIF1Q9H611 641 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 TMEM8AQ9HCN3 771 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 NDFIP2Q9NV92 336 aa10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 CDV3Q9UKY7 258 aaKnown RBP10.12□□□□□ -0.79
CTDSPL2-201ENST00000260327 A8MXQ7 604 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 LSM1O15116 133 aaKnown RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 MOCS2O96007 188 aaPredicted RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 GTF2H1P32780 548 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 IFNA8P32881 189 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 NPEPPSP55786 919 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 ITGB3BPQ13352 177 aaPredicted RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 TRADDQ15628 312 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 PODNQ7Z5L7 613 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 YTHDF3Q7Z739 585 aaKnown RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 TMPRSS6Q8IU80 811 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 PHF21AQ96BD5 680 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 RASSF9O75901 435 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 KCNK10P57789 538 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 NFX1Q12986 1120 aaKnown RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 NFIXQ14938 502 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 TAS2R42Q7RTR8 314 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 CCDC33Q8N5R6 958 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 FEZF2Q8TBJ5 459 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 WHRNQ9P202 907 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 KRT36O76013 467 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 SPRP35270 261 aaPredicted RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 RPL10AP62906 217 aaKnown RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 BMPR2Q13873 1038 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 GTF2H3Q13889 308 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 RC3H1Q5TC82 1133 aaKnown RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 ELMO3Q96BJ8 720 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 KIAA1683Q9H0B3 1180 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 ZNF212Q9UDV6 495 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 ZMYND8Q9ULU4 1186 aaPredicted RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 MSH4O15457 936 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 PYGLP06737 847 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 RPL21P46778 160 aaKnown RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 LRRC74AQ0VAA2 488 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 PWP1Q13610 501 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 INAQ16352 499 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 GPAT2Q6NUI2 795 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 FAM43BQ6ZT52 329 aaPredicted RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 PRUNE1Q86TP1 453 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 CDH24Q86UP0 819 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 ZSCAN18Q8TBC5 510 aaPredicted RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 OXNAD1Q96HP4 312 aaPredicted RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 ZFRQ96KR1 1074 aaKnown RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 POP1Q99575 1024 aaKnown RBP10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 EFCAB1Q9HAE3 211 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 ATAD3AQ9NVI7 634 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 MROH7Q68CQ1 1323 aa10.11□□□□□ -0.79
CTDSPL2-201ENST00000260327 TLR2O60603 784 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms