RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 S100A12P80511 92 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 PPP2R2BQ00005 443 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 PCDH1Q08174 1060 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 SLC9A5Q14940 896 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 ZMYND11Q15326 602 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 KIAA1958Q8N8K9 716 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 OTUD7AQ8TE49 926 aaPredicted RBP7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 CAVIN3Q969G5 261 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 TTC17Q96AE7 1141 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 MAGED4Q96JG8 741 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 FAM96AQ9H5X1 160 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 SETD4Q9NVD3 440 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 CLEC11AQ9Y240 323 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 BTBD3Q9Y2F9 522 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 MROH7Q68CQ1 1323 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 BTN3A1O00481 513 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 NTRK1P04629 796 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 HLA-FP30511 346 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 GPSM2P81274 684 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 RAPSNQ13702 412 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 DGUOKQ16854 277 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 RASGRP2Q7LDG7 609 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 NLRP10Q86W26 655 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 NT5DC4Q86YG4 428 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 ERI1Q8IV48 349 aaKnown RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 KRT78Q8N1N4 520 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 CCNYL1Q8N7R7 359 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 ZBTB38Q8NAP3 1195 aaPredicted RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 USP13Q92995 863 aaPredicted RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 SLC4A5Q9BY07 1137 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 TLR3O15455 904 aaKnown RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 KCNN4O15554 427 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 MZF1P28698 734 aaPredicted RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 CTSWP56202 376 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 CDC16Q13042 620 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 PDZK1Q5T2W1 519 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 RASSF6Q6ZTQ3 369 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 RTL3Q8N8U3 475 aaKnown RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 SCFD2Q8WU76 684 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 PDCD6IPQ8WUM4 868 aaKnown RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 RBM14Q96PK6 669 aaKnown RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 COPS4Q9BT78 406 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 THTPAQ9BU02 230 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 ZC3H7BQ9UGR2 993 aaKnown RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 CCDC78A2IDD5 438 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 ANKRD34BA5PLL1 514 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 B2RBV5 119 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 ZNF879B4DU55 563 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 POC1B-GALNT4F8VUJ3 575 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 H0YCG3 227 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 SPOPO43791 374 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 ARPP19P56211 112 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 VAC14Q08AM6 782 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 EPS8Q12929 822 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 TMED2Q15363 201 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 AKIRIN2Q53H80 203 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 SIGIRRQ6IA17 410 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 CRTC1Q6UUV9 634 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 KRT77Q7Z794 578 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 POC5Q8NA72 575 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 RIN3Q8TB24 985 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 SH3TC2Q8TF17 1288 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 CEP170P1Q96L14 293 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 UBXN6Q9BZV1 441 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 OR2B2Q9GZK3 357 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 NLRC4Q9NPP4 1024 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 CTNND2Q9UQB3 1225 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 ZDHHC9Q9Y397 364 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 LRRC42Q9Y546 428 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 PMF1-BGLAPU3KQ54 211 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 A0A0B4J203 849 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 CIAO1O76071 339 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 NFICP08651 508 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 HOXA10P31260 410 aaPredicted RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 HOXC8P31273 242 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 PHKA1P46020 1223 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 PRKCEQ02156 737 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 MLLT1Q03111 559 aaPredicted RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 PKN1Q16512 942 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 PTPN21Q16825 1174 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 ZNF544Q6NX49 715 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 CASC4Q6P4E1 433 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 FIP1L1Q6UN15 594 aaKnown RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 ZNF786Q8N393 782 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 TAB3Q8N5C8 712 aaPredicted RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 C7orf57Q8NEG2 295 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 NUDT16L1Q9BRJ7 211 aaKnown RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 TINF2Q9BSI4 451 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 PACSIN1Q9BY11 444 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 REXO4Q9GZR2 422 aaKnown RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 C6orf62Q9GZU0 229 aaPredicted RBP7□□□□□ -1.29
PDGFRA-201ENST00000257290 NDST4Q9H3R1 872 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 CATSPERZQ9NTU4 200 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 AMFRQ9UKV5 643 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 SNX7Q9UNH6 387 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 A0A1W2PQ27 194 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 A0A1W2PQ64 194 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 A0A1W2PQD8 194 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 H3BNX3 289 aa7□□□□□ -1.29
PDGFRA-201ENST00000257290 STX16-NPEPL1H3BU86 382 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms