RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 MYO3AQ8NEV4 1616 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 RIMBP3Q9UFD9 1639 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 TRIM49D1C9J1S8 452 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 TBX3O15119 743 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 TRIM24O15164 1050 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 UNC5CO95185 931 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 RPL5P46777 297 aaKnown RBP11.38□□□□□ -0.59
DCLK1-201ENST00000255448 NCKAP1LP55160 1127 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 MTMR2Q13614 643 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 TMC3Q7Z5M5 1100 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 FRMD5Q7Z6J6 570 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 AGBL1Q96MI9 1066 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 ZNF560Q96MR9 790 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 LMCD1Q9NZU5 365 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 GRID1Q9ULK0 1009 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 A0A087X0T9 212 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 CYP26A1O43174 497 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 PHGDHO43175 533 aaKnown RBP11.38□□□□□ -0.59
DCLK1-201ENST00000255448 MYCP01106 439 aaPredicted RBP11.38□□□□□ -0.59
DCLK1-201ENST00000255448 FAM228BP0C875 321 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 CCT3P49368 545 aaKnown RBP11.38□□□□□ -0.59
DCLK1-201ENST00000255448 BCAR1P56945 870 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 SLC15A2Q16348 729 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 PYDC1Q8WXC3 89 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 ERGIC2Q96RQ1 377 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 TRIM62Q9BVG3 475 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 TBC1D10AQ9BXI6 508 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 COPG2Q9UBF2 871 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 FAM8A1Q9UBU6 413 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 ZNF70Q9UC06 446 aaPredicted RBP11.38□□□□□ -0.59
DCLK1-201ENST00000255448 ZC3H13Q5T200 1668 aaKnown RBP11.38□□□□□ -0.59
DCLK1-201ENST00000255448 FCHO1O14526 889 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 APRTP07741 180 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 THRAP10827 490 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 CD44P16070 742 aaKnown RBP11.38□□□□□ -0.59
DCLK1-201ENST00000255448 TFE3P19532 575 aaPredicted RBP11.38□□□□□ -0.59
DCLK1-201ENST00000255448 SLC9A1P19634 815 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 SESN2P58004 480 aaPredicted RBP11.38□□□□□ -0.59
DCLK1-201ENST00000255448 USP46P62068 366 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 ERVK-9P63128 1117 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 SNAPC2Q13487 334 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 TTC39BQ5VTQ0 682 aaPredicted RBP11.38□□□□□ -0.59
DCLK1-201ENST00000255448 MAGEC3Q8TD91 643 aa11.38□□□□□ -0.59
DCLK1-201ENST00000255448 OLA1Q9NTK5 396 aaKnown RBP11.38□□□□□ -0.59
DCLK1-201ENST00000255448 SAC3D1A6NKF1 404 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 NDUFB10O96000 172 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 PAMP19021 973 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 PSMA4P25789 261 aaKnown RBP11.37□□□□□ -0.59
DCLK1-201ENST00000255448 SLC1A1P43005 524 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 PLEKHM3Q6ZWE6 761 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 GPD1LQ8N335 351 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 EML4Q9HC35 981 aaKnown RBP11.37□□□□□ -0.59
DCLK1-201ENST00000255448 DDX56Q9NY93 547 aaKnown RBP11.37□□□□□ -0.59
DCLK1-201ENST00000255448 ARMCX1Q9P291 453 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 NRXN1Q9ULB1 1477 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 ABLIM1O14639 778 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 IDH3BO43837 385 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 FDPSP14324 419 aaKnown RBP11.37□□□□□ -0.59
DCLK1-201ENST00000255448 MROH9Q5TGP6 573 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 PARK7Q99497 189 aaKnown RBP11.37□□□□□ -0.59
DCLK1-201ENST00000255448 CCSER1Q9C0I3 900 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 HMG20AQ9NP66 347 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 BFARQ9NZS9 450 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 MEI4A8MW99 385 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 KLHL41O60662 606 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 TMEM253P0C7T8 217 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 SSTR3P32745 418 aaPredicted RBP11.37□□□□□ -0.59
DCLK1-201ENST00000255448 PDK3Q15120 406 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 GSTA3Q16772 222 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 SGSM1Q2NKQ1 1148 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 HEATR6Q6AI08 1181 aaKnown RBP11.37□□□□□ -0.59
DCLK1-201ENST00000255448 C16orf86Q6ZW13 317 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 FBXO33Q7Z6M2 555 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 SRBD1Q8N5C6 995 aaKnown RBP11.37□□□□□ -0.59
DCLK1-201ENST00000255448 TNIP2Q8NFZ5 429 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 ACTRT1Q8TDG2 376 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 KIAA1683Q9H0B3 1180 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 C6orf203Q9P0P8 240 aaPredicted RBP11.37□□□□□ -0.59
DCLK1-201ENST00000255448 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.37□□□□□ -0.59
DCLK1-201ENST00000255448 CHORDC1Q9UHD1 332 aaPredicted RBP11.37□□□□□ -0.59
DCLK1-201ENST00000255448 SOX13Q9UN79 622 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 NAALADL1Q9UQQ1 740 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 PEX1O43933 1283 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 CTDNEP1O95476 244 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 ATP6V1E1P36543 226 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 SERPINB9P50453 376 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 ABCE1P61221 599 aaKnown RBP11.37□□□□□ -0.59
DCLK1-201ENST00000255448 TAF1CQ15572 869 aaPredicted RBP11.37□□□□□ -0.59
DCLK1-201ENST00000255448 XKR3Q5GH77 459 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 C6orf10Q5SRN2 563 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 CDC42EP5Q6NZY7 148 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 PLEKHG4BQ96PX9 1271 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 STK33Q9BYT3 514 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 DCCP43146 1447 aa11.37□□□□□ -0.59
DCLK1-201ENST00000255448 SNX2O60749 519 aa11.36□□□□□ -0.59
DCLK1-201ENST00000255448 SEMA3DO95025 777 aa11.36□□□□□ -0.59
DCLK1-201ENST00000255448 BGNP21810 368 aa11.36□□□□□ -0.59
DCLK1-201ENST00000255448 JAK1P23458 1154 aa11.36□□□□□ -0.59
DCLK1-201ENST00000255448 SDC4P31431 198 aa11.36□□□□□ -0.59
DCLK1-201ENST00000255448 RECQLP46063 649 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms