RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 STX18Q9P2W9 335 aaKnown RBP16.6■□□□□ 0.25
SLC6A8-201ENST00000253122 ZC3H7BQ9UGR2 993 aaKnown RBP16.6■□□□□ 0.25
SLC6A8-201ENST00000253122 TBX20Q9UMR3 447 aa16.6■□□□□ 0.25
SLC6A8-201ENST00000253122 SNHG28P0DPA3 235 aa16.6■□□□□ 0.25
SLC6A8-201ENST00000253122 ELK3P41970 407 aa16.6■□□□□ 0.25
SLC6A8-201ENST00000253122 VCPP55072 806 aaKnown RBP16.6■□□□□ 0.25
SLC6A8-201ENST00000253122 SEZ6Q53EL9 994 aa16.6■□□□□ 0.25
SLC6A8-201ENST00000253122 SPATA18Q8TC71 538 aa16.6■□□□□ 0.25
SLC6A8-201ENST00000253122 MSTO1Q9BUK6 570 aa16.6■□□□□ 0.25
SLC6A8-201ENST00000253122 DMAP1Q9NPF5 467 aaPredicted RBP16.6■□□□□ 0.25
SLC6A8-201ENST00000253122 TAGLN3Q9UI15 199 aa16.6■□□□□ 0.25
SLC6A8-201ENST00000253122 NOCTQ9UK39 431 aaKnown RBP16.6■□□□□ 0.25
SLC6A8-201ENST00000253122 A0A1B0GVG6 124 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 A8MXQ7 604 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 CALB1P05937 261 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 GNAZP19086 355 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 SLC25A3Q00325 362 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 TRIM72Q6ZMU5 477 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 LDHDQ86WU2 507 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 C12orf50Q8NA57 414 aaPredicted RBP16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 VPS11Q9H270 941 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 FBXO28Q9NVF7 368 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 DDTLA6NHG4 134 aaPredicted RBP16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 K7ERI5 159 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 ABHD2P08910 425 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 SNRPAP09012 282 aaKnown RBP16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 GLRA2P23416 452 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 ECE1P42892 770 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 RPL7AP62424 266 aaKnown RBP16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 SPIRE1Q08AE8 756 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 MAP7D1Q3KQU3 841 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 TFDP3Q5H9I0 405 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 PPP6R3Q5H9R7 873 aaPredicted RBP16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 TCHHL1Q5QJ38 904 aaPredicted RBP16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 ZC3H3Q8IXZ2 948 aaKnown RBP16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 GPR88Q9GZN0 384 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 PACSIN3Q9UKS6 424 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 PIK3R2O00459 728 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 PRPF4O43172 522 aaKnown RBP eCLIP16.59■□□□□ 0.255e-15■■■□□ 16
SLC6A8-201ENST00000253122 LIASO43766 372 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 FAM200BP0CF97 657 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 HADHBP55084 474 aaKnown RBP16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 PSMC1P62191 440 aaKnown RBP16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 FAM163AQ96GL9 167 aaPredicted RBP16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 RBAKQ9NYW8 714 aaPredicted RBP16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 SHOC2Q9UQ13 582 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 CCDC88AQ3V6T2 1871 aa16.59■□□□□ 0.25
SLC6A8-201ENST00000253122 GTF2H1P32780 548 aa16.58■□□□□ 0.25
SLC6A8-201ENST00000253122 KBTBD12Q3ZCT8 623 aa16.58■□□□□ 0.25
SLC6A8-201ENST00000253122 SRPK1Q96SB4 655 aaKnown RBP16.58■□□□□ 0.25
SLC6A8-201ENST00000253122 ECSITQ9BQ95 431 aa16.58■□□□□ 0.25
SLC6A8-201ENST00000253122 NGRNQ9NPE2 291 aaKnown RBP16.58■□□□□ 0.25
SLC6A8-201ENST00000253122 CACNA1SQ13698 1873 aa16.58■□□□□ 0.25
SLC6A8-201ENST00000253122 TMEM191BP0C7N4 346 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 R3HDM1Q15032 1099 aaKnown RBP16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 RBM15BQ8NDT2 890 aaKnown RBP16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 GSTCDQ8NEC7 633 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 PPWD1Q96BP3 646 aaKnown RBP16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 CNBD2Q96M20 576 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 GCNAQ96QF7 691 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 AIM2O14862 343 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 KRT3P12035 628 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 RARRES1P49788 294 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 CDH6P55285 790 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 PSMC5P62195 406 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 OCRLQ01968 901 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 ROR1Q01973 937 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 EFHC1Q5JVL4 640 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 KRT80Q6KB66 452 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 MTHFD1LQ6UB35 978 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 PSPC1Q8WXF1 523 aaKnown RBP16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 ATXN7L3BQ96GX2 97 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 GABBR1Q9UBS5 961 aa16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 AGO2Q9UKV8 859 aaKnown RBP16.58■□□□□ 0.24
SLC6A8-201ENST00000253122 ZBTB7AO95365 584 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 STRIP1Q5VSL9 837 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 LPCAT4Q643R3 524 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 C7orf43Q8WVR3 580 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 APPL1Q9UKG1 709 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 RPL26L1Q9UNX3 145 aaKnown RBP16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 CASQ2O14958 399 aaPredicted RBP16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 PSMD10O75832 226 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 KRT7P08729 469 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 CCNFP41002 786 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 NPTX2P47972 431 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 MARK2Q7KZI7 788 aaKnown RBP16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 RTKN2Q8IZC4 609 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 GDPD5Q8WTR4 605 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 USP6NLQ92738 828 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 TUBGCP5Q96RT8 1024 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 PCDH9Q9HC56 1237 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 DMAC2Q9NW81 257 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 DDX56Q9NY93 547 aaKnown RBP16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 SEPT10Q9P0V9 454 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 GAKO14976 1311 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 KBTBD13C9JR72 458 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 ALOX15BO15296 676 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 KCNN4O15554 427 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 T-ENOLP0DO92 83 aa16.57■□□□□ 0.24
SLC6A8-201ENST00000253122 COPAP53621 1224 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms