RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 TRAPPC3O43617 180 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 GPR32O75388 356 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 KIAA0754O94854 1291 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 SETSIPP0DME0 302 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 DARSP14868 501 aaKnown RBP15.89■□□□□ 0.13
DDX49-201ENST00000247003 KDELR1P24390 212 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 MMP13P45452 471 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 GPS1Q13098 491 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 LONRF1Q17RB8 773 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 KCNT1Q5JUK3 1230 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 PCGF5Q86SE9 256 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 RFX6Q8HWS3 928 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 RELL1Q8IUW5 271 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 HSPH1Q92598 858 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 CENPTQ96BT3 561 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 TTC25Q96NG3 672 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 RBM15Q96T37 977 aaKnown RBP eCLIP15.89■□□□□ 0.13
DDX49-201ENST00000247003 KATNAL1Q9BW62 490 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 AP5M1Q9H0R1 490 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 NINJ2Q9NZG7 142 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 USP18Q9UMW8 372 aa15.89■□□□□ 0.13
DDX49-201ENST00000247003 UBQLN1Q9UMX0 589 aaKnown RBP15.89■□□□□ 0.13
DDX49-201ENST00000247003 CST8O60676 142 aa15.88■□□□□ 0.13
DDX49-201ENST00000247003 PCK1P35558 622 aa15.88■□□□□ 0.13
DDX49-201ENST00000247003 ZNF143P52747 638 aaPredicted RBP15.88■□□□□ 0.13
DDX49-201ENST00000247003 SEC24CP53992 1094 aa15.88■□□□□ 0.13
DDX49-201ENST00000247003 AUHQ13825 339 aaKnown RBP15.88■□□□□ 0.13
DDX49-201ENST00000247003 MORF4L2Q15014 288 aa15.88■□□□□ 0.13
DDX49-201ENST00000247003 OASLQ15646 514 aaKnown RBP15.88■□□□□ 0.13
DDX49-201ENST00000247003 KYNUQ16719 465 aa15.88■□□□□ 0.13
DDX49-201ENST00000247003 MORN1Q5T089 497 aa15.88■□□□□ 0.13
DDX49-201ENST00000247003 BBS12Q6ZW61 710 aa15.88■□□□□ 0.13
DDX49-201ENST00000247003 ZNF560Q96MR9 790 aa15.88■□□□□ 0.13
DDX49-201ENST00000247003 CNPY3Q9BT09 278 aa15.88■□□□□ 0.13
DDX49-201ENST00000247003 MAK16Q9BXY0 300 aaKnown RBP15.88■□□□□ 0.13
DDX49-201ENST00000247003 PCSK1NQ9UHG2 260 aa15.88■□□□□ 0.13
DDX49-201ENST00000247003 GNEQ9Y223 722 aaKnown RBP15.88■□□□□ 0.13
DDX49-201ENST00000247003 PIN4Q9Y237 131 aaKnown RBP15.88■□□□□ 0.13
DDX49-201ENST00000247003 MBLAC1A4D2B0 266 aaPredicted RBP15.87■□□□□ 0.13
DDX49-201ENST00000247003 C3orf70A6NLC5 250 aaPredicted RBP15.87■□□□□ 0.13
DDX49-201ENST00000247003 E5RJQ4 531 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 MYO1CO00159 1063 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 ECM2O94769 699 aaPredicted RBP15.87■□□□□ 0.13
DDX49-201ENST00000247003 IFNB1P01574 187 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 CHN1P15882 459 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 IL1R2P27930 398 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 MIPP30301 263 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 HOXA11P31270 313 aaPredicted RBP15.87■□□□□ 0.13
DDX49-201ENST00000247003 PSEN2P49810 448 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 OTUD4Q01804 1114 aaKnown RBP15.87■□□□□ 0.13
DDX49-201ENST00000247003 PRAMEF19Q5SWL8 479 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 UBAP2Q5T6F2 1119 aaKnown RBP15.87■□□□□ 0.13
DDX49-201ENST00000247003 FAM183BPQ6ZVS7 135 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 UNC93AQ86WB7 457 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 RSAD2Q8WXG1 361 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 CFAP57Q96MR6 1250 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 CALN1Q9BXU9 219 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 EIF2AQ9BY44 585 aaKnown RBP15.87■□□□□ 0.13
DDX49-201ENST00000247003 RSAD1Q9HA92 442 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 CNTN3Q9P232 1028 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 TUBGCP4Q9UGJ1 667 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 SHOC2Q9UQ13 582 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 MCF2LO15068 1137 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 PRPSAP2O60256 369 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 RECQL4O94761 1208 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 TRUB2O95900 331 aaKnown RBP15.87■□□□□ 0.13
DDX49-201ENST00000247003 CD4P01730 458 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 MYL3P08590 195 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 PDGFRAP16234 1089 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 IFI35P80217 286 aaPredicted RBP15.87■□□□□ 0.13
DDX49-201ENST00000247003 PDE4CQ08493 712 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 STAT4Q14765 748 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 TAF1CQ15572 869 aaPredicted RBP15.87■□□□□ 0.13
DDX49-201ENST00000247003 SLC35B2Q8TB61 432 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 ACTL9Q8TC94 416 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 DNAJB3Q8WWF6 145 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 XPO6Q96QU8 1125 aaKnown RBP15.87■□□□□ 0.13
DDX49-201ENST00000247003 TSPAN18Q96SJ8 248 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 NCAPGQ9BPX3 1015 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 TMEM121Q9BTD3 319 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 APOL6Q9BWW8 343 aa15.87■□□□□ 0.13
DDX49-201ENST00000247003 NXF3Q9H4D5 531 aaKnown RBP15.87■□□□□ 0.13
DDX49-201ENST00000247003 INTS9Q9NV88 658 aaKnown RBP15.87■□□□□ 0.13
DDX49-201ENST00000247003 ATXN2Q99700 1313 aaKnown RBP15.87■□□□□ 0.13
DDX49-201ENST00000247003 A0A087WUV0 522 aaPredicted RBP15.86■□□□□ 0.13
DDX49-201ENST00000247003 APOC4-APOC2K7ER74 178 aa15.86■□□□□ 0.13
DDX49-201ENST00000247003 APOC2P02655 101 aa15.86■□□□□ 0.13
DDX49-201ENST00000247003 ABHD2P08910 425 aa15.86■□□□□ 0.13
DDX49-201ENST00000247003 GNAT1P11488 350 aa15.86■□□□□ 0.13
DDX49-201ENST00000247003 PNPLA4P41247 253 aa15.86■□□□□ 0.13
DDX49-201ENST00000247003 MAGEA4P43358 317 aa15.86■□□□□ 0.13
DDX49-201ENST00000247003 HUNKP57058 714 aa15.86■□□□□ 0.13
DDX49-201ENST00000247003 PPARDQ03181 441 aa15.86■□□□□ 0.13
DDX49-201ENST00000247003 GLRA4Q5JXX5 417 aa15.86■□□□□ 0.13
DDX49-201ENST00000247003 CENPUQ71F23 418 aa15.86■□□□□ 0.13
DDX49-201ENST00000247003 PRUNE1Q86TP1 453 aa15.86■□□□□ 0.13
DDX49-201ENST00000247003 ACOT1Q86TX2 421 aa15.86■□□□□ 0.13
DDX49-201ENST00000247003 SESTD1Q86VW0 696 aa15.86■□□□□ 0.13
DDX49-201ENST00000247003 ZDHHC17Q8IUH5 632 aa15.86■□□□□ 0.13
DDX49-201ENST00000247003 MAP7D3Q8IWC1 876 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms