RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 MT-ND3P03897 115 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 ATF7P17544 494 aaPredicted RBP13.04□□□□□ -0.32
NR1D1-201ENST00000246672 RPL5P46777 297 aaKnown RBP13.04□□□□□ -0.32
NR1D1-201ENST00000246672 ARHGAP8P85298 464 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 CYLC2Q14093 348 aaPredicted RBP13.04□□□□□ -0.32
NR1D1-201ENST00000246672 SNRNP35Q16560 246 aaKnown RBP13.04□□□□□ -0.32
NR1D1-201ENST00000246672 NADK2Q4G0N4 442 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 KYAT3Q6YP21 454 aaKnown RBP13.04□□□□□ -0.32
NR1D1-201ENST00000246672 TRMT1LQ7Z2T5 733 aaKnown RBP13.04□□□□□ -0.32
NR1D1-201ENST00000246672 C12orf56Q8IXR9 622 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 KATNAL2Q8IYT4 538 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 CERS5Q8N5B7 392 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 PYROXD1Q8WU10 500 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 DCAKDQ8WVC6 231 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 SERAC1Q96JX3 654 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 CCDC17Q96LX7 622 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 ZNF577Q9BSK1 485 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 DHRS4Q9BTZ2 278 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 PKD2L1Q9P0L9 805 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 NYAP2Q9P242 653 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 MYPNQ86TC9 1320 aa13.04□□□□□ -0.32
NR1D1-201ENST00000246672 BTBD19C9JJ37 291 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 RGL2O15211 777 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 SUPT3HO75486 399 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 NDUFB10O96000 172 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 IFNB1P01574 187 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 TCF4P15884 667 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 PCSK6P29122 969 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 STIP1P31948 543 aaKnown RBP13.03□□□□□ -0.32
NR1D1-201ENST00000246672 GPC3P51654 580 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 CACNB3P54284 484 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 ALDH18A1P54886 795 aaKnown RBP13.03□□□□□ -0.32
NR1D1-201ENST00000246672 SLC25A3Q00325 362 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 TCP10Q12799 353 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 EFHC1Q5JVL4 640 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 HAUS6Q7Z4H7 955 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 ANKRD23Q86SG2 305 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 ZNF554Q86TJ5 538 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 ARID3BQ8IVW6 561 aaPredicted RBP13.03□□□□□ -0.32
NR1D1-201ENST00000246672 CEP70Q8NHQ1 597 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 ARHGEF1Q92888 912 aaKnown RBP13.03□□□□□ -0.32
NR1D1-201ENST00000246672 C11orf70Q9BRQ4 267 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 WDR83Q9BRX9 315 aaKnown RBP13.03□□□□□ -0.32
NR1D1-201ENST00000246672 RAB20Q9NX57 234 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 KCNK4Q9NYG8 393 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 MARCOQ9UEW3 520 aaPredicted RBP13.03□□□□□ -0.32
NR1D1-201ENST00000246672 STRIP2Q9ULQ0 834 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 POLIQ9UNA4 740 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 ZNF335Q9H4Z2 1342 aaPredicted RBP13.03□□□□□ -0.32
NR1D1-201ENST00000246672 SLC16A4O15374 487 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 CLPTM1O96005 669 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 CFHP08603 1231 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 KITP10721 976 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 NSFP46459 744 aaKnown RBP13.03□□□□□ -0.32
NR1D1-201ENST00000246672 FOLH1Q04609 750 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 NFX1Q12986 1120 aaKnown RBP13.03□□□□□ -0.32
NR1D1-201ENST00000246672 MPP3Q13368 585 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 TRIP10Q15642 601 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 HIF1AQ16665 826 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 FNBP1LQ5T0N5 605 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 PASD1Q8IV76 773 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 OGFOD1Q8N543 542 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 ALLCQ8N6M5 410 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 HIPK4Q8NE63 616 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 EXD1Q8NHP7 514 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 ZFP28Q8NHY6 868 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 USP6NLQ92738 828 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 FAM81BQ96LP2 452 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 ACSS3Q9H6R3 686 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 CNTN3Q9P232 1028 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 RBBP6Q7Z6E9 1792 aaKnown RBP13.03□□□□□ -0.32
NR1D1-201ENST00000246672 PMM2O15305 246 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 CPOXP36551 454 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 UBAP2LQ14157 1087 aaKnown RBP13.03□□□□□ -0.32
NR1D1-201ENST00000246672 HIC1Q14526 733 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 TAB3Q8N5C8 712 aaPredicted RBP13.03□□□□□ -0.32
NR1D1-201ENST00000246672 FBXL13Q8NEE6 735 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.03□□□□□ -0.32
NR1D1-201ENST00000246672 POMGNT1Q8WZA1 660 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 IRGQQ8WZA9 623 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 GCNAQ96QF7 691 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 MECRQ9BV79 373 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 CCDC106Q9BWC9 280 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 PCDHGB4Q9UN71 923 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 PCDHGB5Q9Y5G0 923 aa13.03□□□□□ -0.32
NR1D1-201ENST00000246672 TMEM221A6NGB7 291 aa13.02□□□□□ -0.32
NR1D1-201ENST00000246672 AP1G1O43747 822 aa13.02□□□□□ -0.32
NR1D1-201ENST00000246672 GDF11O95390 407 aa13.02□□□□□ -0.32
NR1D1-201ENST00000246672 C6orf222P0C671 652 aaPredicted RBP13.02□□□□□ -0.32
NR1D1-201ENST00000246672 YY1P25490 414 aa13.02□□□□□ -0.32
NR1D1-201ENST00000246672 PHBP35232 272 aa13.02□□□□□ -0.32
NR1D1-201ENST00000246672 EPHB1P54762 984 aa13.02□□□□□ -0.32
NR1D1-201ENST00000246672 CCNIQ14094 377 aa13.02□□□□□ -0.32
NR1D1-201ENST00000246672 TLR1Q15399 786 aa13.02□□□□□ -0.32
NR1D1-201ENST00000246672 MYLK3Q32MK0 819 aa13.02□□□□□ -0.32
NR1D1-201ENST00000246672 MAP3K21Q5TCX8 1036 aa13.02□□□□□ -0.32
NR1D1-201ENST00000246672 ANKRD22Q5VYY1 191 aa13.02□□□□□ -0.32
NR1D1-201ENST00000246672 ZBTB8BQ8NAP8 495 aaPredicted RBP13.02□□□□□ -0.32
NR1D1-201ENST00000246672 ATP11CQ8NB49 1132 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms