RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.05□□□□□ -0.482e-6■■□□□ 13.5
SOX9-201ENST00000245479 GALNT15Q8N3T1 639 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 RIBC1Q8N443 379 aaPredicted RBP12.05□□□□□ -0.48
SOX9-201ENST00000245479 TLCD1Q96CP7 247 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 TRAPPC9Q96Q05 1148 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 R3HDMLQ9H3Y0 253 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 TMEM8AQ9HCN3 771 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 IVNS1ABPQ9Y6Y0 642 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 ADCY3O60266 1144 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 KIF22Q14807 665 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 MAPK6Q16659 721 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 HIF1AQ16665 826 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 ANKRD20A4Q4UJ75 823 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 HYIQ5T013 277 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 RNF43Q68DV7 783 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 DARS2Q6PI48 645 aaKnown RBP12.05□□□□□ -0.48
SOX9-201ENST00000245479 ISLR2Q6UXK2 745 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 SYDE1Q6ZW31 735 aaPredicted RBP12.05□□□□□ -0.48
SOX9-201ENST00000245479 TMEM165Q9HC07 324 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 GTF3C4Q9UKN8 822 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 CHD4Q14839 1912 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 M0QYV0 167 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 LCA5LO95447 670 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 TNNC2P02585 160 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 CXCL8P10145 99 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 FAM102AQ5T9C2 384 aaPredicted RBP12.05□□□□□ -0.48
SOX9-201ENST00000245479 MFSD7Q6UXD7 560 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 ARID3BQ8IVW6 561 aaPredicted RBP12.05□□□□□ -0.48
SOX9-201ENST00000245479 PAF1Q8N7H5 531 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 FAM71DQ8N9W8 422 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 MCPH1Q8NEM0 835 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 BTBD10Q9BSF8 475 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 SHCBP1LQ9BZQ2 653 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 DMAP1Q9NPF5 467 aaPredicted RBP12.05□□□□□ -0.48
SOX9-201ENST00000245479 DNPEPQ9ULA0 475 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 NUB1Q9Y5A7 615 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 CST8O60676 142 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 DGAT1O75907 488 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 F7P08709 466 aaPredicted RBP12.05□□□□□ -0.48
SOX9-201ENST00000245479 RAB27AP51159 221 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 ZBTB17Q13105 803 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 TXNRD3NBQ6F5E7 133 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 GLIS1Q8NBF1 620 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 GALNT8Q9NY28 637 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 WHRNQ9P202 907 aa12.05□□□□□ -0.48
SOX9-201ENST00000245479 TXNP10599 105 aaKnown RBP12.04□□□□□ -0.48
SOX9-201ENST00000245479 CYP2C8P10632 490 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 ADORA2BP29275 332 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 SSTR1P30872 391 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 SP2Q02086 613 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 MCL1Q07820 350 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 FASTKD3Q14CZ7 662 aaKnown RBP12.04□□□□□ -0.48
SOX9-201ENST00000245479 TDRD10Q5VZ19 366 aaKnown RBP12.04□□□□□ -0.48
SOX9-201ENST00000245479 ACAD10Q6JQN1 1059 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 SCUBE1Q8IWY4 988 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 RHOT1Q8IXI2 618 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 CLEC4DQ8WXI8 215 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 HES6Q96HZ4 224 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 SLC38A10Q9HBR0 1119 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 LZTS1Q9Y250 596 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 DDX3YO15523 660 aaKnown RBP12.04□□□□□ -0.48
SOX9-201ENST00000245479 PDE5AO76074 875 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 PSMG1O95456 288 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 SKIV2L2P42285 1042 aaKnown RBP12.04□□□□□ -0.48
SOX9-201ENST00000245479 NFX1Q12986 1120 aaKnown RBP12.04□□□□□ -0.48
SOX9-201ENST00000245479 FAM47CQ5HY64 1035 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 TREML2Q5T2D2 321 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 C16orf87Q6PH81 154 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 MOXD1Q6UVY6 613 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 PRPF39Q86UA1 669 aaKnown RBP12.04□□□□□ -0.48
SOX9-201ENST00000245479 TRIM74Q86UV6 250 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 TRIM73Q86UV7 250 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 ECHDC2Q86YB7 292 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 CCNYQ8ND76 341 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 DCPSQ96C86 337 aaKnown RBP12.04□□□□□ -0.48
SOX9-201ENST00000245479 FAM81BQ96LP2 452 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 SERPINI1Q99574 410 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 MKNK1Q9BUB5 465 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 XAB2Q9HCS7 855 aaKnown RBP12.04□□□□□ -0.48
SOX9-201ENST00000245479 CLIC5Q9NZA1 410 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 EPS15L1Q9UBC2 864 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 MYL2P10916 166 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 CHRNB2P17787 502 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 DSG3P32926 999 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 OR6B3Q8NGW1 331 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 CXorf38Q8TB03 319 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 ZNF317Q96PQ6 595 aaPredicted RBP12.04□□□□□ -0.48
SOX9-201ENST00000245479 ARMCX1Q9P291 453 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 UVRAGQ9P2Y5 699 aa12.04□□□□□ -0.48
SOX9-201ENST00000245479 LOC100653049A0A140TA62 436 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 ABLIM1O14639 778 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 KRT34O76011 436 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 PRKCIP41743 596 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 RABGGTBP53611 331 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 PARP6Q2NL67 630 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 HSDL1Q3SXM5 330 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 RARS2Q5T160 578 aaKnown RBP12.03□□□□□ -0.48
SOX9-201ENST00000245479 C3orf62Q6ZUJ4 267 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 CCNJLQ8IV13 435 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 ZDHHC14Q8IZN3 488 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms