RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 ARL2P36404 184 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 TFAMQ00059 246 aaKnown RBP12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 SP2Q02086 613 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 CHSY1Q86X52 802 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 LRRC71Q8N4P6 559 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 GPRASP2Q96D09 838 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 CGRRF1Q99675 332 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 PCDHGC3Q9UN70 934 aa12.55□□□□□ -0.4
SEC61A1-201ENST00000243253 EME2A4GXA9 379 aaPredicted RBP12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 CAPN14A8MX76 684 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 E5RJQ4 531 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 TM9SF1O15321 606 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 ASNSP08243 561 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 PHC3Q8NDX5 983 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 TFAP2BQ92481 460 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 SERAC1Q96JX3 654 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 TARS2Q9BW92 718 aaKnown RBP12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 ZNF408Q9H9D4 720 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 ADAMTS5Q9UNA0 930 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 LAMA2P24043 3122 aaKnown RBP12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 GSC2O15499 205 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 ASS1P00966 412 aaKnown RBP12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 CA4P22748 312 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 PDIA2Q13087 525 aaKnown RBP12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 LIN9Q5TKA1 542 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 OR52E8Q6IFG1 317 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 USP37Q86T82 979 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 MCEEQ96PE7 176 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 PAFAH2Q99487 392 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 KLF6Q99612 283 aaPredicted RBP12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 DHX33Q9H6R0 707 aaKnown RBP12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 MAFBQ9Y5Q3 323 aaPredicted RBP12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 PAPPA2Q9BXP8 1791 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 GOLGA8RI6L899 631 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 ENDOD1O94919 500 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 WEE2P0C1S8 567 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 CNTN2Q02246 1040 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 ACSBG2Q5FVE4 666 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 KCNT1Q5JUK3 1230 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 FOXB2Q5VYV0 432 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 CAPRIN2Q6IMN6 1127 aaKnown RBP12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 RINLQ6ZS11 566 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 PAXIP1Q6ZW49 1069 aaPredicted RBP12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 NCAPG2Q86XI2 1143 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 LPAR1Q92633 364 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 NLRP4Q96MN2 994 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 NPHS2Q9NP85 383 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 ZFATQ9P243 1243 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 TJP2Q9UDY2 1190 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 AGO2Q9UKV8 859 aaKnown RBP12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 POLIQ9UNA4 740 aa12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 MAGED2Q9UNF1 606 aaPredicted RBP12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 MRPL42Q9Y6G3 142 aaKnown RBP12.54□□□□□ -0.4
SEC61A1-201ENST00000243253 PPP1R12AO14974 1030 aaPredicted RBP12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 NEBLO76041 1014 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 UPP2O95045 317 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 LSM8O95777 96 aaKnown RBP12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 RPL22P35268 128 aaKnown RBP12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 TGFB2P61812 414 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 FSTL1Q12841 308 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 XRRA1Q6P2D8 792 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 ANKMY2Q8IV38 441 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 NUDCD1Q96RS6 583 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 POLR3FQ9H1D9 316 aaPredicted RBP12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 PORCNQ9H237 461 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 ZWILCHQ9H900 591 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 PICK1Q9NRD5 415 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 PCSK1NQ9UHG2 260 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 IGKV6D-21A0A0A0MT36 114 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 LRCH4O75427 683 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 CTCFP49711 727 aaPredicted RBP12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 RAD23BP54727 409 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 LBRQ14739 615 aaKnown RBP12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 TAF11Q15544 211 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 CYP4A22Q5TCH4 519 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 DCUN1D2Q6PH85 259 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 CENPUQ71F23 418 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 MCPH1Q8NEM0 835 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 LRRC8CQ8TDW0 803 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 WDR60Q8WVS4 1066 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 PLA2G4CQ9UP65 541 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 ZNF148Q9UQR1 794 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 PPME1Q9Y570 386 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 TEX264Q9Y6I9 313 aa12.53□□□□□ -0.4
SEC61A1-201ENST00000243253 KLF11O14901 512 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 MAFGO15525 162 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 CD48P09326 243 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 PRKCEQ02156 737 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 KRT72Q14CN4 511 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 SETDB1Q15047 1291 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 WDR44Q5JSH3 913 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 NAIF1Q69YI7 327 aaPredicted RBP12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 ZNF449Q6P9G9 518 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 VSIG1Q86XK7 387 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 PPIL6Q8IXY8 311 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 TRAPPC12Q8WVT3 735 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 BTBD10Q9BSF8 475 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 DCLRE1BQ9H816 532 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms