RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 DPEP3Q9H4B8 488 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 GOLGA2P5Q9HBQ8 144 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 FAM49BQ9NUQ9 324 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 GDAP2Q9NXN4 497 aa19.45■□□□□ 0.7
HOXC11-201ENST00000243082 ABT1Q9ULW3 272 aaKnown RBP19.45■□□□□ 0.7
HOXC11-201ENST00000243082 KPNA7A9QM74 516 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 HCRTO43612 131 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 SHOX2O60902 331 aaPredicted RBP19.44■□□□□ 0.7
HOXC11-201ENST00000243082 FLT3LGP49771 235 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 RGS7P49802 495 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 MRPS6P82932 125 aaKnown RBP19.44■□□□□ 0.7
HOXC11-201ENST00000243082 SKOR1P84550 965 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 KCNT1Q5JUK3 1230 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 EMC10Q5UCC4 262 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 OR6B2Q6IFH4 312 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 GDF6Q6KF10 455 aaPredicted RBP19.44■□□□□ 0.7
HOXC11-201ENST00000243082 SESTD1Q86VW0 696 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 SLC35F5Q8WV83 523 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 AAASQ9NRG9 546 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 DNPEPQ9ULA0 475 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 CDY2AQ9Y6F7 541 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 SCN10AQ9Y5Y9 1956 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 A8MXQ7 604 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 XPOTO43592 962 aaKnown RBP19.44■□□□□ 0.7
HOXC11-201ENST00000243082 FGFR1P11362 822 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 RARGP13631 454 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 KLRC2P26717 231 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 MIPP30301 263 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 ZNF143P52747 638 aaPredicted RBP19.44■□□□□ 0.7
HOXC11-201ENST00000243082 EIF3BP55884 814 aaKnown RBP19.44■□□□□ 0.7
HOXC11-201ENST00000243082 TRIM32Q13049 653 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 SLMAPQ14BN4 828 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 DNAJC21Q5F1R6 531 aaKnown RBP19.44■□□□□ 0.7
HOXC11-201ENST00000243082 UBAP2Q5T6F2 1119 aaKnown RBP19.44■□□□□ 0.7
HOXC11-201ENST00000243082 ARHGAP17Q68EM7 881 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 TWF2Q6IBS0 349 aaKnown RBP19.44■□□□□ 0.7
HOXC11-201ENST00000243082 LIMS2Q7Z4I7 341 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 WNT8BQ93098 351 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 SLC4A5Q9BY07 1137 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 MIS12Q9H081 205 aa19.44■□□□□ 0.7
HOXC11-201ENST00000243082 C2CD4BA6NLJ0 364 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 GABBR2O75899 941 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 SHBGP04278 402 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 ATF2P15336 505 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 KDELR1P24390 212 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 ADCY8P40145 1251 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 PNPLA4P41247 253 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 ITGA8P53708 1063 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 NKX3-2P78367 333 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 BYSLQ13895 437 aaKnown RBP19.43■□□□□ 0.7
HOXC11-201ENST00000243082 TAZQ16635 292 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 TMEM110Q86TL2 294 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 ZNF560Q96MR9 790 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 ASNSD1Q9NWL6 643 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 PCSK1NQ9UHG2 260 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 EFR3BQ9Y2G0 817 aa19.43■□□□□ 0.7
HOXC11-201ENST00000243082 PTGESO14684 152 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 TRUB2O95900 331 aaKnown RBP19.42■□□□□ 0.7
HOXC11-201ENST00000243082 SETSIPP0DME0 302 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 LMO2P25791 158 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 ACTN2P35609 894 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 TAF6P49848 677 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 SLC29A2Q14542 456 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 ZNF618Q5T7W0 954 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 SH3PXD2AQ5TCZ1 1133 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 KDM7AQ6ZMT4 941 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 ZNF365Q70YC5 407 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 PRUNE1Q86TP1 453 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 CRYBG2Q8N1P7 616 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 CCDC89Q8N998 374 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 CMASQ8NFW8 434 aaPredicted RBP19.42■□□□□ 0.7
HOXC11-201ENST00000243082 RXFP2Q8WXD0 754 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 CNPY3Q9BT09 278 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 CENPHQ9H3R5 247 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 USP18Q9UMW8 372 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 DRG1Q9Y295 367 aaKnown RBP19.42■□□□□ 0.7
HOXC11-201ENST00000243082 TRPV2Q9Y5S1 764 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 SEPT4O43236 478 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 RNF8O76064 485 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 PDGFRBP09619 1106 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 GPD1P21695 349 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 PCK1P35558 622 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 GNL1P36915 607 aaPredicted RBP19.42■□□□□ 0.7
HOXC11-201ENST00000243082 VPS41P49754 854 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 LMNB2Q03252 620 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 PDE4CQ08493 712 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 TAF5Q15542 800 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 DENND2CQ68D51 928 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 OLFML1Q6UWY5 402 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 TRAIPQ9BWF2 469 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 CAPS2Q9BXY5 557 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 HESX1Q9UBX0 185 aa19.42■□□□□ 0.7
HOXC11-201ENST00000243082 M0QZ92 97 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 CD48P09326 243 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 PDGFRAP16234 1089 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 NR1D1P20393 614 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 CHKAP35790 457 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 CAP1Q01518 475 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 CAV1Q03135 178 aa19.41■□□□□ 0.7
HOXC11-201ENST00000243082 PRKCZQ05513 592 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms