RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 DEFB118Q96PH6 123 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 SYNCQ9H7C4 482 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 JPH1Q9HDC5 661 aaPredicted RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 INTS7Q9NVH2 962 aaKnown RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 DDX25Q9UHL0 483 aaKnown RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 LUC7L2Q9Y383 392 aaKnown RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 PCDHB6Q9Y5E3 794 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 COL4A4P53420 1690 aaPredicted RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 KDM3AQ9Y4C1 1321 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 KIAA1671Q9BY89 1806 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 MKI67P46013 3256 aaKnown RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 A0A0J9YVX5 310 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 A8MUI8 341 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 J3KRW8 73 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 PLD2O14939 933 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 MAGEB3O15480 346 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 C22orf31O95567 290 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 GGPS1O95749 300 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 MYCP01106 439 aaPredicted RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 ALDH2P05091 517 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 ASGR1P07306 291 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 VIMP08670 466 aaKnown RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 TXNP10599 105 aaKnown RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 GSTT1P30711 240 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 SFNP31947 248 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 CD97P48960 835 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 MMP16P51512 607 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 KRT76Q01546 638 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 FAAP100Q0VG06 881 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 CAMK2GQ13555 558 aaPredicted RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 LBRQ14739 615 aaKnown RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 CRY1Q16526 586 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 ATP13A4Q4VNC1 1196 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 CCDC38Q502W7 563 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 FAM133BQ5BKY9 247 aaKnown RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 RILPL1Q5EBL4 403 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 C6orf183Q5T699 404 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 TMEM154Q6P9G4 183 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 ZNF554Q86TJ5 538 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 FCHSD1Q86WN1 690 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 CCDC60Q8IWA6 550 aaPredicted RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 TEX9Q8N6V9 391 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 OR6J1Q8NGC5 347 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 GPR152Q8TDT2 470 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 AFG1LQ8WV93 481 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 ABTB1Q969K4 478 aaPredicted RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 TBATAQ96M53 351 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 DESI2Q9BSY9 194 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 MTG1Q9BT17 334 aaPredicted RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 TCHPQ9BT92 498 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 RUSC1Q9BVN2 902 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 RNF208Q9H0X6 261 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 MRPL44Q9H9J2 332 aaKnown RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 RASSF1Q9NS23 344 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 DDX19AQ9NUU7 478 aaKnown RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 ETNK2Q9NVF9 386 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 ATAD3AQ9NVI7 634 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 KLK14Q9P0G3 267 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 SUCLA2Q9P2R7 463 aaPredicted RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 SLC9A2Q9UBY0 812 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 STK17AQ9UEE5 414 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 CDC23Q9UJX2 597 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 MAGEA13PA6NCF6 341 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 ARVCFO00192 962 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 FOXD2O60548 495 aaPredicted RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 USO1O60763 962 aaKnown RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 FBXO21O94952 628 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 PGK1P00558 417 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 ASGR2P07307 311 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 IDO1P14902 403 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 PDCP20941 246 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 ITGB8P26012 769 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 BMP8BP34820 402 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 JAK3P52333 1124 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 PMS2P54278 862 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 CSE1LP55060 971 aaKnown RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 CTAG1AP78358 180 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 AKAP17AQ02040 695 aaKnown RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 PCBP1Q15365 356 aaKnown RBP eCLIP3.86□□□□□ -1.79
UFM1-201ENST00000239878 TCTN1Q2MV58 587 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 SGSM1Q2NKQ1 1148 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 LACTB2Q53H82 288 aaPredicted RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 TTC38Q5R3I4 469 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 SPOCD1Q6ZMY3 1216 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 LONP2Q86WA8 852 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 SCUBE1Q8IWY4 988 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 C4orf19Q8IY42 314 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 SLFN12Q8IYM2 578 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 PCSK9Q8NBP7 692 aaKnown RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 WDR60Q8WVS4 1066 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 AZIN2Q96A70 460 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 TRIM43Q96BQ3 446 aaPredicted RBP3.86□□□□□ -1.79
UFM1-201ENST00000239878 PPP1R14BQ96C90 147 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 CYFIP2Q96F07 1278 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 PNMA5Q96PV4 448 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 WNT8AQ9H1J5 351 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 SUV39H2Q9H5I1 410 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 FBRSQ9HAH7 460 aa3.86□□□□□ -1.79
UFM1-201ENST00000239878 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.86□□□□□ -1.793e-7■■□□□ 14.1
UFM1-201ENST00000239878 DLGAP2Q9P1A6 1054 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms