RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 PLS3P13797 630 aa9□□□□□ -0.97
IFT43-201ENST00000238628 U2AF2P26368 475 aaKnown RBP eCLIP9□□□□□ -0.97
IFT43-201ENST00000238628 CDC25AP30304 524 aa9□□□□□ -0.97
IFT43-201ENST00000238628 AVPR1AP37288 418 aa9□□□□□ -0.97
IFT43-201ENST00000238628 TNFSF9P41273 254 aa9□□□□□ -0.97
IFT43-201ENST00000238628 TRAPPC10P48553 1259 aa9□□□□□ -0.97
IFT43-201ENST00000238628 GUCY2FP51841 1108 aa9□□□□□ -0.97
IFT43-201ENST00000238628 CDR1P51861 262 aa9□□□□□ -0.97
IFT43-201ENST00000238628 NEK4P51957 841 aa9□□□□□ -0.97
IFT43-201ENST00000238628 LILRA4P59901 499 aa9□□□□□ -0.97
IFT43-201ENST00000238628 CXADRP78310 365 aa9□□□□□ -0.97
IFT43-201ENST00000238628 RAD51AP2Q09MP3 1159 aa9□□□□□ -0.97
IFT43-201ENST00000238628 NBR1Q14596 966 aa9□□□□□ -0.97
IFT43-201ENST00000238628 SLC39A12Q504Y0 691 aa9□□□□□ -0.97
IFT43-201ENST00000238628 C2orf27AQ580R0 203 aa9□□□□□ -0.97
IFT43-201ENST00000238628 TRIM68Q6AZZ1 485 aa9□□□□□ -0.97
IFT43-201ENST00000238628 CC2D1AQ6P1N0 951 aaPredicted RBP9□□□□□ -0.97
IFT43-201ENST00000238628 RABEPKQ7Z6M1 372 aa9□□□□□ -0.97
IFT43-201ENST00000238628 FMNL3Q8IVF7 1028 aa9□□□□□ -0.97
IFT43-201ENST00000238628 CMTM8Q8IZV2 173 aa9□□□□□ -0.97
IFT43-201ENST00000238628 MAB21L3Q8N8X9 362 aa9□□□□□ -0.97
IFT43-201ENST00000238628 IGSF22Q8N9C0 903 aa9□□□□□ -0.97
IFT43-201ENST00000238628 TMEM161BQ8NDZ6 487 aa9□□□□□ -0.97
IFT43-201ENST00000238628 MDGA1Q8NFP4 955 aa9□□□□□ -0.97
IFT43-201ENST00000238628 GIPC2Q8TF65 315 aa9□□□□□ -0.97
IFT43-201ENST00000238628 SETD7Q8WTS6 366 aaKnown RBP9□□□□□ -0.97
IFT43-201ENST00000238628 FAM212AQ96EL1 285 aa9□□□□□ -0.97
IFT43-201ENST00000238628 CHFRQ96EP1 664 aa9□□□□□ -0.97
IFT43-201ENST00000238628 BICD1Q96G01 975 aa9□□□□□ -0.97
IFT43-201ENST00000238628 FNBP1Q96RU3 617 aa9□□□□□ -0.97
IFT43-201ENST00000238628 TSPAN18Q96SJ8 248 aa9□□□□□ -0.97
IFT43-201ENST00000238628 P2RY13Q9BPV8 354 aa9□□□□□ -0.97
IFT43-201ENST00000238628 SEMA4CQ9C0C4 833 aa9□□□□□ -0.97
IFT43-201ENST00000238628 HAPLN2Q9GZV7 340 aa9□□□□□ -0.97
IFT43-201ENST00000238628 RPF1Q9H9Y2 349 aaKnown RBP9□□□□□ -0.97
IFT43-201ENST00000238628 IL21Q9HBE4 155 aa9□□□□□ -0.97
IFT43-201ENST00000238628 CAPN10Q9HC96 672 aa9□□□□□ -0.97
IFT43-201ENST00000238628 HPS4Q9NQG7 708 aa9□□□□□ -0.97
IFT43-201ENST00000238628 IL17BQ9UHF5 180 aa9□□□□□ -0.97
IFT43-201ENST00000238628 ZMYM5Q9UJ78 669 aa9□□□□□ -0.97
IFT43-201ENST00000238628 NOTCH2Q04721 2471 aa9□□□□□ -0.97
IFT43-201ENST00000238628 SCN1AP35498 2009 aa9□□□□□ -0.97
IFT43-201ENST00000238628 CREBBPQ92793 2442 aa9□□□□□ -0.97
IFT43-201ENST00000238628 DOPEY1Q5JWR5 2465 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 OTOL1A6NHN0 477 aaPredicted RBP8.99□□□□□ -0.97
IFT43-201ENST00000238628 PP2D1A8MPX8 630 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 PPEF2O14830 753 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 ALDH1A2O94788 518 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 MAPTP10636 758 aaKnown RBP8.99□□□□□ -0.97
IFT43-201ENST00000238628 C6P13671 934 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 HLA-EP13747 358 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 ATF6P18850 670 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 PAX3P23760 479 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 GUCY2CP25092 1073 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 P2RY2P41231 377 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 IL12RB1P42701 662 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 BFSP1Q12934 665 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 ZRSR1Q15695 479 aaKnown RBP8.99□□□□□ -0.97
IFT43-201ENST00000238628 KYAT1Q16773 422 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 SPDYCQ5MJ68 293 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 SPATA1Q5VX52 437 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 PEAR1Q5VY43 1037 aaPredicted RBP8.99□□□□□ -0.97
IFT43-201ENST00000238628 PRICKLE2Q7Z3G6 844 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 KCNK18Q7Z418 384 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 METTL23Q86XA0 190 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 CD302Q8IX05 232 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 THEM5Q8N1Q8 247 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 FRMD1Q8N878 549 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 OR10T2Q8NGX3 314 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 WBP1Q96G27 269 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 PNMA5Q96PV4 448 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 ZCWPW1Q9H0M4 648 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 TDP1Q9NUW8 608 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 PCOLCE2Q9UKZ9 415 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 OBSL1O75147 1896 aa8.99□□□□□ -0.97
IFT43-201ENST00000238628 MYO16Q9Y6X6 1858 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 E9PAM4 449 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 H0YCG3 227 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 PIRO00625 290 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 TLX3O43711 291 aaPredicted RBP8.98□□□□□ -0.97
IFT43-201ENST00000238628 CBFA2T3O75081 653 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 F11P03951 625 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 CYP11A1P05108 521 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 ATXN1LP0C7T5 689 aaKnown RBP8.98□□□□□ -0.97
IFT43-201ENST00000238628 PRR29P0C7W0 189 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 HAPLN1P10915 354 aaPredicted RBP8.98□□□□□ -0.97
IFT43-201ENST00000238628 ARSAP15289 507 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 DDX6P26196 483 aaKnown RBP eCLIP8.98□□□□□ -0.97
IFT43-201ENST00000238628 GJA4P35212 333 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 LIG4P49917 911 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 SEMG2Q02383 582 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 ST3GAL1Q11201 340 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 SMARCB1Q12824 385 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 LY6DQ14210 128 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 ENOX2Q16206 610 aaKnown RBP8.98□□□□□ -0.97
IFT43-201ENST00000238628 IL17AQ16552 155 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 C9orf57Q5W0N0 161 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 NAIF1Q69YI7 327 aaPredicted RBP8.98□□□□□ -0.97
IFT43-201ENST00000238628 TXNDC8Q6A555 127 aa8.98□□□□□ -0.97
IFT43-201ENST00000238628 DTHD1Q6ZMT9 781 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms