RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 RASGEF1CQ8N431 466 aa13.38□□□□□ -0.27
VAMP4-201ENST00000236192 FAM89AQ96GI7 184 aa13.38□□□□□ -0.27
VAMP4-201ENST00000236192 APOPT1Q96IL0 206 aa13.38□□□□□ -0.27
VAMP4-201ENST00000236192 PLEKHA8Q96JA3 519 aa13.38□□□□□ -0.27
VAMP4-201ENST00000236192 NFS1Q9Y697 457 aa13.38□□□□□ -0.27
VAMP4-201ENST00000236192 A0A087X0B3 334 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 ARPC4-TTLL3A0A0A6YYG9 625 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 hCG_1984214I3L0E3 225 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 RASA1P20936 1047 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 PEX2P28328 305 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 SERPINB5P36952 375 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 CENPPQ6IPU0 288 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 ZNF713Q8N859 430 aaPredicted RBP13.37□□□□□ -0.27
VAMP4-201ENST00000236192 FBXL13Q8NEE6 735 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 KRT35Q92764 455 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 GNEQ9Y223 722 aaKnown RBP13.37□□□□□ -0.27
VAMP4-201ENST00000236192 TMEM98Q9Y2Y6 226 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 GOLGA8JA6NMD2 632 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 TRIM49D1C9J1S8 452 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 MYO1DO94832 1006 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 MED26O95402 600 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 ABHD2P08910 425 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 P4HA1P13674 534 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 PRKACBP22694 351 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 COPZ1P61923 177 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 RCOR2Q8IZ40 523 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 FAM237BA0A1B0GVD1 139 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 AKR1B1P15121 316 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 ME2P23368 584 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 ACAT1P24752 427 aaKnown RBP13.37□□□□□ -0.27
VAMP4-201ENST00000236192 MAP3K10Q02779 954 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 TMEM214Q6NUQ4 689 aaKnown RBP13.37□□□□□ -0.27
VAMP4-201ENST00000236192 SLC2A7Q6PXP3 512 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 PTF1AQ7RTS3 328 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 CYP2U1Q7Z449 544 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 AGR3Q8TD06 166 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 APOL4Q9BPW4 351 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 EPB41L4AQ9HCS5 686 aaPredicted RBP13.37□□□□□ -0.27
VAMP4-201ENST00000236192 FBXO6Q9NRD1 293 aaPredicted RBP13.37□□□□□ -0.27
VAMP4-201ENST00000236192 KBTBD4Q9NVX7 518 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 RNF17Q9BXT8 1623 aaKnown RBP13.37□□□□□ -0.27
VAMP4-201ENST00000236192 IGSF1Q8N6C5 1336 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 H3BSA7 217 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 CCRL2O00421 344 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 PDXKO00764 312 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 PRKAB2O43741 272 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 SNX17Q15036 470 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 ZFP69Q49AA0 526 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 ODR4Q5SWX8 454 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 METTL21CQ5VZV1 264 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 POTEHQ6S545 545 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 ASRGL1Q7L266 308 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 PDSS2Q86YH6 399 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 PPIL6Q8IXY8 311 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 TTC39CQ8N584 583 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 B3GALT6Q96L58 329 aa13.37□□□□□ -0.27
VAMP4-201ENST00000236192 XPO7Q9UIA9 1087 aaKnown RBP13.37□□□□□ -0.27
VAMP4-201ENST00000236192 RBAK-RBAKDNI3L0D1 243 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 PSMD12O00232 456 aaPredicted RBP13.36□□□□□ -0.27
VAMP4-201ENST00000236192 PRPF4O43172 522 aaKnown RBP eCLIP13.36□□□□□ -0.27
VAMP4-201ENST00000236192 WDR72Q3MJ13 1102 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 LUZP2Q86TE4 346 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 NDUFAF2Q8N183 169 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 SNX31Q8N9S9 440 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 RBM15BQ8NDT2 890 aaKnown RBP13.36□□□□□ -0.27
VAMP4-201ENST00000236192 HEPHQ9BQS7 1158 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 APEX2Q9UBZ4 518 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 TNNI1P19237 187 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 KLRC3Q07444 240 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 HELQQ8TDG4 1101 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 APBB2Q92870 758 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 GTSE1Q9NYZ3 720 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 IP6K2Q9UHH9 426 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 FARP2O94887 1054 aaPredicted RBP13.36□□□□□ -0.27
VAMP4-201ENST00000236192 SERPINA6P08185 405 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 STX5Q13190 355 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 CTC1Q2NKJ3 1217 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 SEPT12Q8IYM1 358 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 BHLHE22Q8NFJ8 381 aaPredicted RBP13.36□□□□□ -0.27
VAMP4-201ENST00000236192 ARHGEF1Q92888 912 aaKnown RBP13.36□□□□□ -0.27
VAMP4-201ENST00000236192 FRMD8Q9BZ67 464 aaPredicted RBP13.36□□□□□ -0.27
VAMP4-201ENST00000236192 MYMKA6NI61 221 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 PI4K2BG5E9Z4 385 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 GAS2O43903 313 aaKnown RBP13.36□□□□□ -0.27
VAMP4-201ENST00000236192 TYK2P29597 1187 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 ACTR3P61158 418 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 PTK6Q13882 451 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 DPYSQ14117 519 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 EPHA10Q5JZY3 1008 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 KBTBD2Q8IY47 623 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 CSRNP1Q96S65 589 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 TMOD3Q9NYL9 352 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 ERVK-11Q9UQG0 969 aa13.36□□□□□ -0.27
VAMP4-201ENST00000236192 QRICH2Q9H0J4 1663 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 BTBD19C9JJ37 291 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 E9PBE3 544 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 ZNF263O14978 683 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 FYNP06241 537 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 LDHBP07195 334 aaKnown RBP13.35□□□□□ -0.27
VAMP4-201ENST00000236192 ALOX12P18054 663 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms