RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ZMYND8Q9ULU4 1186 aaPredicted RBP23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 APOC4-APOC2K7ER74 178 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 MGRN1O60291 552 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 MICAL2O94851 1124 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 GH1P01241 217 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 APOC2P02655 101 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 ERBB2P04626 1255 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 GTF2A1P52655 376 aaPredicted RBP23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 SPARCL1Q14515 664 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 FASTKD5Q7L8L6 764 aaKnown RBP23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 NT5DC4Q86YG4 428 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 ATP11CQ8NB49 1132 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 KCTD6Q8NC69 237 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 CXorf38Q8TB03 319 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 SMC6Q96SB8 1091 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 ELOVL4Q9GZR5 314 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 MINDY3Q9H8M7 445 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 RSAD1Q9HA92 442 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 ABCF3Q9NUQ8 709 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 COL1A2P08123 1366 aa23.06■■□□□ 1.28
SMARCD2-201ENST00000225742 FOXO6A8MYZ6 492 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 E7ESA3 106 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 ASMTLO95671 621 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 TRUB2O95900 331 aaKnown RBP23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 CTCFP49711 727 aaPredicted RBP23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 CCDC15Q0P6D6 951 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 LAMC2Q13753 1193 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 WDR78Q5VTH9 848 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 JADE1Q6IE81 842 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 NAT8LQ8N9F0 302 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 SMYD3Q9H7B4 428 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 IFT122Q9HBG6 1241 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 RXFP1Q9HBX9 757 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 TXNRD2Q9NNW7 524 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 MLXIPLQ9NP71 852 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 KLHL14Q9P2G3 628 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 POC1B-GALNT4F8VUJ3 575 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 ITGB3P05106 788 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 CDH8P55286 799 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 WDR4P57081 412 aaKnown RBP23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 GEMIN4P57678 1058 aaKnown RBP23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 KLHL38Q2WGJ6 581 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 RFX6Q8HWS3 928 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 KIAA0319LQ8IZA0 1049 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 LINC01465Q8N7H1 131 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 CPT1BQ92523 772 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 STARD13Q9Y3M8 1113 aa23.05■■□□□ 1.28
SMARCD2-201ENST00000225742 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 ADM5C9JUS6 153 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 UBOX5O94941 541 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 GJB1P08034 283 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 KRT15P19012 456 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 RPL22P35268 128 aaKnown RBP23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 ZNF143P52747 638 aaPredicted RBP23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 ELF3P78545 371 aaPredicted RBP23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 INCA1Q0VD86 236 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 BNIP1Q12981 228 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 CBLBQ13191 982 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 FASTKD3Q14CZ7 662 aaKnown RBP23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 STILQ15468 1287 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 AMHR2Q16671 573 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 Q3C1V9 767 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 TMEM192Q8IY95 271 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 COPS5Q92905 334 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 R3HDMLQ9H3Y0 253 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 PDZD7Q9H5P4 517 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 ITGA11Q9UKX5 1188 aa23.04■■□□□ 1.28
SMARCD2-201ENST00000225742 ENDOD1O94919 500 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 MIPP30301 263 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 FOXN2P32314 431 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 GPD2P43304 727 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 DYNLT1P63172 113 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 RIPK1Q13546 671 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 PYROXD1Q8WU10 500 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 TWNKQ96RR1 684 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 ADPGKQ9BRR6 497 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 CNPY3Q9BT09 278 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 PITPNM3Q9BZ71 974 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 TJP2Q9UDY2 1190 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 BARX2Q9UMQ3 279 aaPredicted RBP23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 C2CD2Q9Y426 696 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 M0QYV0 167 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 MCF2LO15068 1137 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 IQCF3P0C7M6 154 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 STIP1P31948 543 aaKnown RBP23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 EIF3EP60228 445 aaKnown RBP23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 RBP5P82980 135 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 TFDP2Q14188 446 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 TMEM132DQ14C87 1099 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 PKN2Q16513 984 aaKnown RBP23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 SMTNL2Q2TAL5 461 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 FAM133BQ5BKY9 247 aaKnown RBP23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 FAM47CQ5HY64 1035 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 CDR2LQ86X02 465 aaPredicted RBP23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 HPDLQ96IR7 371 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 RNPEPQ9H4A4 650 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 RABGEF1Q9UJ41 708 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 USP18Q9UMW8 372 aa23.03■■□□□ 1.28
SMARCD2-201ENST00000225742 INSRRP14616 1297 aa23.02■■□□□ 1.28
SMARCD2-201ENST00000225742 GPD1P21695 349 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms