RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 CST8O60676 142 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 RPSAP08865 295 aaKnown RBP16.04■□□□□ 0.16
TGFB1-201ENST00000221930 CA4P22748 312 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 ASPAP45381 313 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 LACTBP83111 547 aaPredicted RBP16.04■□□□□ 0.16
TGFB1-201ENST00000221930 MKRN3Q13064 507 aaKnown RBP16.04■□□□□ 0.16
TGFB1-201ENST00000221930 ACCSLQ4AC99 568 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 MSS51Q4VC12 460 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 CWF19L1Q69YN2 538 aaKnown RBP16.04■□□□□ 0.16
TGFB1-201ENST00000221930 PPP1R2P3Q6NXS1 205 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 SLC30A9Q6PML9 568 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 LBX2Q6XYB7 198 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 CENPUQ71F23 418 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 GBP7Q8N8V2 638 aaPredicted RBP16.04■□□□□ 0.16
TGFB1-201ENST00000221930 TRPM4Q8TD43 1214 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 TTC25Q96NG3 672 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 SMC6Q96SB8 1091 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 FOXP3Q9BZS1 431 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 GGA3Q9NZ52 723 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 PCSK1NQ9UHG2 260 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 DRG1Q9Y295 367 aaKnown RBP16.04■□□□□ 0.16
TGFB1-201ENST00000221930 CEP350Q5VT06 3117 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 C3orf70A6NLC5 250 aaPredicted RBP16.04■□□□□ 0.16
TGFB1-201ENST00000221930 ALOX15BO15296 676 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 B4GALT5O43286 388 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 PRKCBP05771 671 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 ITGAVP06756 1048 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 KRT3P12035 628 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 CTCFP49711 727 aaPredicted RBP16.04■□□□□ 0.16
TGFB1-201ENST00000221930 SLC1A5Q15758 541 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 SYCP2LQ5T4T6 812 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 RHPN2Q8IUC4 686 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 RIBC1Q8N443 379 aaPredicted RBP16.04■□□□□ 0.16
TGFB1-201ENST00000221930 DENND1AQ8TEH3 1009 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 TRAPPC12Q8WVT3 735 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 BTBD7Q9P203 1132 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 CORO1CQ9ULV4 474 aaPredicted RBP16.04■□□□□ 0.16
TGFB1-201ENST00000221930 PHTF1Q9UMS5 762 aa16.04■□□□□ 0.16
TGFB1-201ENST00000221930 OGTO15294 1046 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 LRCH4O75427 683 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 SMNDC1O75940 238 aaKnown RBP eCLIP16.03■□□□□ 0.16
TGFB1-201ENST00000221930 HOXC6P09630 235 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 EIF4BP23588 611 aaKnown RBP16.03■□□□□ 0.16
TGFB1-201ENST00000221930 GPX6P59796 221 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 TFDP1Q14186 410 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 ZNF268Q14587 947 aaPredicted RBP16.03■□□□□ 0.16
TGFB1-201ENST00000221930 TAF5Q15542 800 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 MAPK6Q16659 721 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 HIF1AQ16665 826 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 FNBP1LQ5T0N5 605 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 TMEM192Q8IY95 271 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 NKD2Q969F2 451 aaPredicted RBP16.03■□□□□ 0.16
TGFB1-201ENST00000221930 PLEKHG4BQ96PX9 1271 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 MAK16Q9BXY0 300 aaKnown RBP16.03■□□□□ 0.16
TGFB1-201ENST00000221930 XYLT2Q9H1B5 865 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 CPSF3Q9UKF6 684 aaKnown RBP16.03■□□□□ 0.16
TGFB1-201ENST00000221930 SOWAHBA6NEL2 793 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 ZSCAN9O15535 394 aaPredicted RBP16.03■□□□□ 0.16
TGFB1-201ENST00000221930 SLC25A11Q02978 314 aaKnown RBP16.03■□□□□ 0.16
TGFB1-201ENST00000221930 HSDL1Q3SXM5 330 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 BZW1Q7L1Q6 419 aaKnown RBP16.03■□□□□ 0.16
TGFB1-201ENST00000221930 SLC35B2Q8TB61 432 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 AGAP11Q8TF27 550 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 STAMBPL1Q96FJ0 436 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 NLRP4Q96MN2 994 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 C12orf65Q9H3J6 166 aaKnown RBP16.03■□□□□ 0.16
TGFB1-201ENST00000221930 PCDH9Q9HC56 1237 aa16.03■□□□□ 0.16
TGFB1-201ENST00000221930 DNAH12Q6ZR08 3092 aa16.02■□□□□ 0.16
TGFB1-201ENST00000221930 CSDE1O75534 798 aaKnown RBP16.02■□□□□ 0.16
TGFB1-201ENST00000221930 FGFR1P11362 822 aa16.02■□□□□ 0.16
TGFB1-201ENST00000221930 KRT4P19013 534 aa16.02■□□□□ 0.16
TGFB1-201ENST00000221930 EFNA5P52803 228 aa16.02■□□□□ 0.16
TGFB1-201ENST00000221930 PSMC1P62191 440 aaKnown RBP16.02■□□□□ 0.16
TGFB1-201ENST00000221930 TMEM132AQ24JP5 1023 aa16.02■□□□□ 0.16
TGFB1-201ENST00000221930 CEP128Q6ZU80 1094 aa16.02■□□□□ 0.16
TGFB1-201ENST00000221930 CPXM1Q96SM3 734 aa16.02■□□□□ 0.16
TGFB1-201ENST00000221930 DDX56Q9NY93 547 aaKnown RBP16.02■□□□□ 0.16
TGFB1-201ENST00000221930 CLUHO75153 1309 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 TCRBV7S3A2A0A539 114 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 ABLIM1O14639 778 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 LIN7AO14910 233 aaPredicted RBP16.02■□□□□ 0.15
TGFB1-201ENST00000221930 ARIH2O95376 493 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 PYGBP11216 843 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 AP3M2P53677 418 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 SPARCL1Q14515 664 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 CCDC142Q17RM4 750 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 TSHZ1Q6ZSZ6 1077 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 B4GALNT2Q8NHY0 566 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 PYROXD1Q8WU10 500 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 SEPT1Q8WYJ6 367 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 CPT1BQ92523 772 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 ZNF518BQ9C0D4 1074 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 SYNCQ9H7C4 482 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 SHOC2Q9UQ13 582 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 LRRC37A2A6NM11 1700 aa16.02■□□□□ 0.15
TGFB1-201ENST00000221930 WDR91A4D1P6 747 aa16.01■□□□□ 0.15
TGFB1-201ENST00000221930 GOLGA8RI6L899 631 aa16.01■□□□□ 0.15
TGFB1-201ENST00000221930 INO80B-WBP1J3KQ70 363 aa16.01■□□□□ 0.15
TGFB1-201ENST00000221930 ROR2Q01974 943 aaKnown RBP16.01■□□□□ 0.15
TGFB1-201ENST00000221930 NR1H3Q13133 447 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms