RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CALB2P22676 271 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 IL1R2P27930 398 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 CAPSQ13938 189 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 TAF11Q15544 211 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 SLC45A4Q5BKX6 768 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 TREML2Q5T2D2 321 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 WDR49Q8IV35 697 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 PALM2Q8IXS6 379 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 ARFGAP1Q8N6T3 406 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 JOSD2Q8TAC2 188 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 RSAD2Q8WXG1 361 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 KCNN1Q92952 543 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 ZNF518BQ9C0D4 1074 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 NIF3L1Q9GZT8 377 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 TMEM134Q9H6X4 195 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 SLC17A7Q9P2U7 560 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 TJP2Q9UDY2 1190 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 DCTN4Q9UJW0 460 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 NUMBLQ9Y6R0 609 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 C2CD2LO14523 706 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 EIF4BP23588 611 aaKnown RBP18.11■□□□□ 0.49
USB1-201ENST00000219281 RASSF2P50749 326 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 SLC25A11Q02978 314 aaKnown RBP18.11■□□□□ 0.49
USB1-201ENST00000219281 KLHL38Q2WGJ6 581 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 BBS9Q3SYG4 887 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 DENND1BQ6P3S1 775 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 POLNQ7Z5Q5 900 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 RFWD2Q8NHY2 731 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 ACSS3Q9H6R3 686 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 ALG13Q9NP73 1137 aaKnown RBP18.11■□□□□ 0.49
USB1-201ENST00000219281 SKAP2O75563 359 aaPredicted RBP18.1■□□□□ 0.49
USB1-201ENST00000219281 CD48P09326 243 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 UNC45BQ8IWX7 931 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 ZNF276Q8N554 614 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 STK32AQ8WU08 396 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 MZB1Q8WU39 189 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 DHRS4Q9BTZ2 278 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 FETUBQ9UGM5 382 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 ADCY3O60266 1144 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 LRCH4O75427 683 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 ATG7O95352 703 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 TROVE2P10155 538 aaKnown RBP eCLIP18.1■□□□□ 0.49
USB1-201ENST00000219281 KRT3P12035 628 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 KDELR1P24390 212 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 CDH5P33151 784 aaPredicted RBP18.1■□□□□ 0.49
USB1-201ENST00000219281 AP3M2P53677 418 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 RAD23BP54727 409 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 TRPC3Q13507 836 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 SGSM1Q2NKQ1 1148 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 KIAA0319LQ8IZA0 1049 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 BANPQ8N9N5 519 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 TTC8Q8TAM2 541 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 DCAKDQ8WVC6 231 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 NUDCD1Q96RS6 583 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 KANSL3Q9P2N6 904 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 XPO7Q9UIA9 1087 aaKnown RBP18.1■□□□□ 0.49
USB1-201ENST00000219281 PCDHGC3Q9UN70 934 aa18.1■□□□□ 0.49
USB1-201ENST00000219281 TMEM63AO94886 807 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 TPBGLP0DKB5 382 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 PTPN4P29074 926 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 CNTN2Q02246 1040 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 PTPN20Q4JDL3 420 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 ZC3H12AQ5D1E8 599 aaKnown RBP18.09■□□□□ 0.49
USB1-201ENST00000219281 BBS12Q6ZW61 710 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 CLNKQ7Z7G1 428 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 MANSC1Q9H8J5 431 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 H0Y3Z8 333 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 TRAFD1O14545 582 aaPredicted RBP18.09■□□□□ 0.49
USB1-201ENST00000219281 FAM189A1O60320 539 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 ITGBL1O95965 494 aaPredicted RBP18.09■□□□□ 0.49
USB1-201ENST00000219281 KRT7P08729 469 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 TFAMQ00059 246 aaKnown RBP18.09■□□□□ 0.49
USB1-201ENST00000219281 EMC1Q8N766 993 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 FAM71DQ8N9W8 422 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 TTC13Q8NBP0 860 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 NAF1Q96HR8 494 aaKnown RBP18.09■□□□□ 0.49
USB1-201ENST00000219281 FAXDC2Q96IV6 333 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 FAM167BQ9BTA0 163 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 NIFKQ9BYG3 293 aaKnown RBP18.09■□□□□ 0.49
USB1-201ENST00000219281 PCSK1NQ9UHG2 260 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 CYTH4Q9UIA0 394 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 STRIP2Q9ULQ0 834 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 EFR3BQ9Y2G0 817 aa18.09■□□□□ 0.49
USB1-201ENST00000219281 A0A0G2JND7 137 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 SIGLEC16A6NMB1 481 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 E7ESA3 106 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 TM9SF1O15321 606 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 CD19P15391 556 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 NRLP54845 237 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 BASP1P80723 227 aaKnown RBP18.08■□□□□ 0.48
USB1-201ENST00000219281 HADHQ16836 314 aaKnown RBP18.08■□□□□ 0.48
USB1-201ENST00000219281 DUOXA2Q1HG44 320 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 CTC1Q2NKJ3 1217 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 ZNF699Q32M78 642 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 SPDYAQ5MJ70 313 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 LBX2Q6XYB7 198 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 LRRC6Q86X45 466 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 RFX6Q8HWS3 928 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 PDIK1LQ8N165 341 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 PTPRN2Q92932 1015 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms