RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 WEE2P0C1S8 567 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 RGS2P41220 211 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 CARSP49589 748 aaKnown RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 NCKAP1LP55160 1127 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 TRIM16LQ309B1 348 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 BTBD8Q5XKL5 378 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 IRGCQ6NXR0 463 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 ANGPTL8Q6UXH0 198 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 SLC26A11Q86WA9 606 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 ZNF513Q8N8E2 541 aaPredicted RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 NOA1Q8NC60 698 aaKnown RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 SETD9Q8NE22 299 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 HDAC7Q8WUI4 952 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 TUBGCP3Q96CW5 907 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 CNDP1Q96KN2 507 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 NR1H4Q96RI1 486 aaPredicted RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 MXRA8Q9BRK3 442 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 RUBCNLQ9H714 662 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 ANKZF1Q9H8Y5 726 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 OLA1Q9NTK5 396 aaKnown RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 NCKIPSDQ9NZQ3 722 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 COPG2Q9UBF2 871 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 PCYOX1Q9UHG3 505 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 AURKCQ9UQB9 309 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 DTNAQ9Y4J8 743 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 PHRF1Q9P1Y6 1649 aaKnown RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 SALL3Q9BXA9 1300 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 B2RBV5 119 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 CFAP99D6REC4 459 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 MAP2K7O14733 419 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 TDP2O95551 362 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 CLPTM1O96005 669 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 ERBB2P04626 1255 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 RARBP10826 455 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 RAB14P61106 215 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 DNAJC3Q13217 504 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 TTLL9Q3SXZ7 439 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 NET1Q7Z628 596 aaPredicted RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 FBXO33Q7Z6M2 555 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 FAM162AQ96A26 154 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 APOPT1Q96IL0 206 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 SRPK1Q96SB4 655 aaKnown RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 ZNF184Q99676 751 aaPredicted RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 APOL4Q9BPW4 351 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 C1orf50Q9BV19 199 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 PRKD2Q9BZL6 878 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 TIMMDC1Q9NPL8 285 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 AGPAT3Q9NRZ7 376 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 ZMYND8Q9ULU4 1186 aaPredicted RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 FIS1Q9Y3D6 152 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 PCDHGC5Q9Y5F6 944 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 NCANO14594 1321 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 LRRC10BA6NIK2 292 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 TBKBP1A7MCY6 615 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 AREL1O15033 823 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 USP1O94782 785 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 CRABP2P29373 138 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 STK4Q13043 487 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 NKX1-1Q15270 411 aaPredicted RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 SLC45A4Q5BKX6 768 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 GRTP1Q5TC63 336 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 NOTUMQ6P988 496 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 KRT27Q7Z3Y8 459 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 KRT73Q86Y46 540 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 DCUN1D1Q96GG9 259 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 CPNE1Q99829 537 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 EGFL8Q99944 293 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 BTBD10Q9BSF8 475 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 MUC13Q9H3R2 512 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 LRRC40Q9H9A6 602 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 CYP4F11Q9HBI6 524 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 C15orf41Q9Y2V0 281 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 DISP2A7MBM2 1401 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 SCN4AP35499 1836 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 FRMPD4Q14CM0 1322 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 TK2O00142 265 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 HIST1H2AGP0C0S8 130 aaPredicted RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 HIST1H2ADP20671 130 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 ANTXR2P58335 489 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 GCNT1Q02742 428 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 WASHC5Q12768 1159 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 KRT33BQ14525 404 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 HLFQ16534 295 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 ARMCX4Q5H9R4 360 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 RNF43Q68DV7 783 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 ZCCHC9Q8N567 271 aaKnown RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 KYQ8NBH2 561 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 HIST1H2AHQ96KK5 128 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 HIST1H2AJQ99878 128 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 TRIM51Q9BSJ1 452 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 H2AFJQ9BTM1 129 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 MMTAG2Q9BU76 263 aaKnown RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 TASP1Q9H6P5 420 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 PARVBQ9HBI1 364 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 GIMAP4Q9NUV9 329 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 ATAD3AQ9NVI7 634 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 STK39Q9UEW8 545 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 LAMB1P07942 1786 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 GPR75-ASB3A0A0A6YYF3 556 aa4.57□□□□□ -1.68
CHD9-201ENST00000219084 POU5F1BQ06416 359 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms