RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 PDGFCQ9NRA1 345 aa15.81■□□□□ 0.12
EFNB1-201ENST00000204961 SEPT10Q9P0V9 454 aa15.81■□□□□ 0.12
EFNB1-201ENST00000204961 PACSIN3Q9UKS6 424 aa15.81■□□□□ 0.12
EFNB1-201ENST00000204961 SCINQ9Y6U3 715 aa15.81■□□□□ 0.12
EFNB1-201ENST00000204961 NPM3O75607 178 aaKnown RBP15.81■□□□□ 0.12
EFNB1-201ENST00000204961 KLRC2P26717 231 aa15.81■□□□□ 0.12
EFNB1-201ENST00000204961 BNIP1Q12981 228 aa15.81■□□□□ 0.12
EFNB1-201ENST00000204961 MTFR1Q15390 333 aa15.81■□□□□ 0.12
EFNB1-201ENST00000204961 Q3C1V9 767 aa15.81■□□□□ 0.12
EFNB1-201ENST00000204961 MROH9Q5TGP6 573 aa15.81■□□□□ 0.12
EFNB1-201ENST00000204961 PRPF39Q86UA1 669 aaKnown RBP15.81■□□□□ 0.12
EFNB1-201ENST00000204961 RXFP1Q9HBX9 757 aa15.81■□□□□ 0.12
EFNB1-201ENST00000204961 KCNN4O15554 427 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 MUTP22033 750 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 SERPINB3P29508 390 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 GTF2A2P52657 109 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 VCPP55072 806 aaKnown RBP15.8■□□□□ 0.12
EFNB1-201ENST00000204961 DUOXA2Q1HG44 320 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 SCUBE3Q8IX30 993 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 RCOR2Q8IZ40 523 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 ZCCHC9Q8N567 271 aaKnown RBP15.8■□□□□ 0.12
EFNB1-201ENST00000204961 UTP4Q969X6 686 aaKnown RBP15.8■□□□□ 0.12
EFNB1-201ENST00000204961 TBC1D10AQ9BXI6 508 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 CXCL16Q9H2A7 254 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 hCG_1818297A0A087WSY0 165 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.8■□□□□ 0.12
EFNB1-201ENST00000204961 FAM237BA0A1B0GVD1 139 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 CCDC189A1A4V9 331 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 KBTBD13C9JR72 458 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 LRCH4O75427 683 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 ARIH2O95376 493 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 PDGFRBP09619 1106 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 SAT1P21673 171 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 MIPP30301 263 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 ALDH3A1P30838 453 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 PGGT1BP53609 377 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 TGFB2P61812 414 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 KRT81Q14533 505 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 PLEKHA7Q6IQ23 1121 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 CCDC125Q86Z20 511 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 KATNAL2Q8IYT4 538 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 C12orf50Q8NA57 414 aaPredicted RBP15.8■□□□□ 0.12
EFNB1-201ENST00000204961 CPT1BQ92523 772 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 RBM41Q96IZ5 413 aaKnown RBP15.8■□□□□ 0.12
EFNB1-201ENST00000204961 PORCNQ9H237 461 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 NOP53Q9NZM5 478 aaKnown RBP15.8■□□□□ 0.12
EFNB1-201ENST00000204961 AKT3Q9Y243 479 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 COL4A5P29400 1685 aa15.8■□□□□ 0.12
EFNB1-201ENST00000204961 A0A0B4J269 797 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 LPXNO60711 386 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 RNF8O76064 485 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 GRIA1P42261 906 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 LAMTOR4Q0VGL1 99 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 BIRC2Q13490 618 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 TNFAIP1Q13829 316 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 FAM83AQ86UY5 434 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 ALLCQ8N6M5 410 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 ARFGAP1Q8N6T3 406 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 MOCOSQ96EN8 888 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 CLPTM1LQ96KA5 538 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 CGRRF1Q99675 332 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 ADPGKQ9BRR6 497 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 CLUHO75153 1309 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 PLSCR1O15162 318 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 MAPK13O15264 365 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 LYPLA2O95372 231 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 ERBB2P04626 1255 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 INHBAP08476 426 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 GHRP10912 638 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 PDIK1LQ8N165 341 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 VPS52Q8N1B4 723 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 ARMC2Q8NEN0 867 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 GPRASP2Q96D09 838 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 RILPQ96NA2 401 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 ZNF570Q96NI8 536 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 PSTPIP1O43586 416 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 BAG2O95816 211 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 PDGFRAP16234 1089 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 GM2AP17900 193 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 NR1H3Q13133 447 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 PTK7Q13308 1070 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 ZNF667Q5HYK9 610 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 C16orf46Q6P387 395 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 TRIM11Q96F44 468 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 MMP19Q99542 508 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 FAM49AQ9H0Q0 323 aaPredicted RBP15.79■□□□□ 0.12
EFNB1-201ENST00000204961 AVENQ9NQS1 362 aaPredicted RBP15.79■□□□□ 0.12
EFNB1-201ENST00000204961 C15orf41Q9Y2V0 281 aa15.79■□□□□ 0.12
EFNB1-201ENST00000204961 ASMTLO95671 621 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 TNNC2P02585 160 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 ENO1P06733 434 aaKnown RBP15.78■□□□□ 0.12
EFNB1-201ENST00000204961 ATP2A2P16615 1042 aaKnown RBP15.78■□□□□ 0.12
EFNB1-201ENST00000204961 CDKN2BP42772 138 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 FKBP1AP62942 108 aaKnown RBP15.78■□□□□ 0.12
EFNB1-201ENST00000204961 CRYMQ14894 314 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 CCDC142Q17RM4 750 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 ALYREFQ86V81 257 aaKnown RBP15.78■□□□□ 0.12
EFNB1-201ENST00000204961 MCUR1Q96AQ8 359 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 FAM81BQ96LP2 452 aa15.78■□□□□ 0.12
EFNB1-201ENST00000204961 NTPCRQ9BSD7 190 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms