RNA–Protein interactions for RNA: ENSMUST00000221370.1

Trim9-208, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 2,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-208ENSMUST00000221370 Mcoln2Q8K595 566 aa22.31■■□□□ 1.16
Trim9-208ENSMUST00000221370 Med7Q9CZB6 233 aa22.31■■□□□ 1.16
Trim9-208ENSMUST00000221370 Cpsf3Q9QXK7 684 aa22.31■■□□□ 1.16
Trim9-208ENSMUST00000221370 Tnfrsf14A0A1W2P7D5 276 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Timm44O35857 452 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 RenbpP82343 430 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Gm3414Q3TNU4 584 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Nipal4Q8BZF2 406 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Arfip2Q8K221 341 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Pde6cQ91ZQ1 861 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Cttnbp2nlQ99LJ0 638 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Cdca7Q9D0M2 382 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Tmod2Q9JKK7 351 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Atp6v1c1Q9Z1G3 382 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 MycsQ9Z304 431 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 DffaO54786 331 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 MafP54843 370 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Eif3eP60229 445 aaKnown RBP22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Psmc1P62192 440 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Tff2Q03404 129 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Zscan2Q07230 614 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Ugt3a1Q3UP75 523 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Znf185Q62394 352 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Mea1Q64327 174 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Sh3rf1Q69ZI1 892 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 RimklbQ80WS1 387 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Zfp263Q8CF60 680 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Ccdc80Q8R2G6 949 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Hkdc1Q91W97 915 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Gps1Q99LD4 471 aaKnown RBP22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Tmem68Q9D850 329 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 PdiltQ9DAN1 588 aa22.3■■□□□ 1.16
Trim9-208ENSMUST00000221370 Tekt5G5E8A8 557 aa22.29■■□□□ 1.16
Trim9-208ENSMUST00000221370 Irf3P70671 419 aa22.29■■□□□ 1.16
Trim9-208ENSMUST00000221370 Lrch2Q3UMG5 773 aa22.29■■□□□ 1.16
Trim9-208ENSMUST00000221370 Hif1aQ61221 836 aaKnown RBP22.29■■□□□ 1.16
Trim9-208ENSMUST00000221370 Tfdp2Q64163 446 aa22.29■■□□□ 1.16
Trim9-208ENSMUST00000221370 Ptk6Q64434 451 aa22.29■■□□□ 1.16
Trim9-208ENSMUST00000221370 Rmi1Q9D4G9 616 aa22.29■■□□□ 1.16
Trim9-208ENSMUST00000221370 Plekha5E9Q6H8 1269 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Hoxb8P09632 243 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Hoxc6P10629 235 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Pms2P54279 859 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Grb10Q60760 621 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Cypt2Q6P924 180 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Acap2Q6ZQK5 770 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Znf365Q8BG89 408 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Q8BGA7 448 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Chmp2bQ8BJF9 213 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Trpv6Q91WD2 767 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Decr1Q9CQ62 335 aaKnown RBP22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Tekt1Q9DAJ2 418 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Col4a3Q9QZS0 1669 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Ptpn3A2ALK8 913 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Gm3424L7N298 263 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Gm8246M0QWX9 263 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Scp2P32020 547 aaKnown RBP22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Rps6kc1Q8BLK9 1056 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Ppme1Q8BVQ5 386 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Prpf31Q8CCF0 499 aaKnown RBP22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Trappc12Q8K2L8 797 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Ablim1Q8K4G5 861 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 MutyhQ99P21 515 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 MlklQ9D2Y4 472 aa22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Mrpl4Q9DCU6 294 aaKnown RBP22.28■■□□□ 1.16
Trim9-208ENSMUST00000221370 Apold1E9Q0X2 246 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 DldO08749 509 aaKnown RBP22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Elk3P41971 409 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Mxi1P50540 228 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 InhbaQ04998 424 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Psg28Q4KL66 472 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Rbl2Q64700 1135 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Nudt16Q6P3D0 195 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Prr18Q6PAN7 307 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Ccdc40Q8BI79 1192 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Gpr20Q8BYC4 358 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Cpt1bQ924X2 772 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Arl8bQ9CQW2 186 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Drc3Q9D5E4 523 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Actl7bQ9QY83 418 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Slc8a3S4R2P9 928 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Fndc3c1Q6DFV6 1356 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Farp1F8VPU2 1048 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Cdh16O88338 830 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Kif5aP33175 1027 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 HpdP49429 393 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Mapk4Q6P5G0 583 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Cacna2d2Q6PHS9 1154 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 PimregQ8BFY7 231 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Mical2Q8BML1 960 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Mxra7Q9CZH7 178 aa22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Riok3Q9DBU3 519 aaKnown RBP22.27■■□□□ 1.16
Trim9-208ENSMUST00000221370 Ankfn1A0A140LIW7 1083 aa22.26■■□□□ 1.15
Trim9-208ENSMUST00000221370 Olfr1305A2AVW3 312 aa22.26■■□□□ 1.15
Trim9-208ENSMUST00000221370 Apol11aE9PZG0 334 aa22.26■■□□□ 1.15
Trim9-208ENSMUST00000221370 PtpraP18052 829 aa22.26■■□□□ 1.15
Trim9-208ENSMUST00000221370 RarbP22605 482 aa22.26■■□□□ 1.15
Trim9-208ENSMUST00000221370 Prmt9Q3U3W5 846 aa22.26■■□□□ 1.15
Trim9-208ENSMUST00000221370 Cyp3a16Q64481 504 aa22.26■■□□□ 1.15
Trim9-208ENSMUST00000221370 Capn3Q64691 821 aa22.26■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms