RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Amz1Q8BVF9 502 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Epn2Q8CHU3 595 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Tbc1d22aQ8R5A6 516 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 CtsfQ9R013 462 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Atp1a4Q9WV27 1032 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Znf804aA2AKY4 1200 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 1700001O22RikA2APZ1 375 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Rfx8D3YU81 596 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Gm3002E9PW72 216 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Vmn2r19G5E8G4 854 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Rgs2O08849 211 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Cdc6O89033 562 aaKnown RBP7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Ly6dP35459 127 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Tubb5P99024 444 aaKnown RBP7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Tars2Q3UQ84 723 aaKnown RBP7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Zrsr2Q62377 462 aaKnown RBP7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Jade3Q6IE82 823 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Stk40Q7TNL3 435 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Rd3Q8BRE0 195 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Tada2aQ8CHV6 443 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Adgrg2Q8CJ12 1009 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Mmgt1Q8K273 131 aaKnown RBP7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Rassf9Q8K342 435 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Mcur1Q9CXD6 340 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Thumpd2Q9CZB3 528 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Rtn3Q9ES97 964 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Capn10Q9ESK3 666 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Krt16Q9Z2K1 469 aa7.89□□□□□ -1.15
Usp40-204ENSMUST00000187758 Olfr1305A2AVW3 312 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Prdm15E9Q8T2 1174 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Mup13L7N222 235 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Trappc3O55013 180 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Fcer2P20693 331 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Bpifa6Q0VGU8 367 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Emc10Q3TAS6 258 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Rbm20Q3UQS8 1199 aaKnown RBP7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 HpseQ6YGZ1 535 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Creb3l2Q8BH52 521 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Rassf10Q8BL43 508 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Apol9bQ8C7I4 310 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Fermt3Q8K1B8 665 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Hip1Q8VD75 1029 aaKnown RBP7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Apol9aQ8VDU3 310 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 DpysQ9EQF5 519 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Psmg1Q9JK23 289 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Tspan3Q9QY33 253 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Gm45861A0A1B0GRY3 1923 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Supt3B0QZW4 406 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 BhmtO35490 407 aaKnown RBP7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 DffaO54786 331 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Gpr25P0C5I1 358 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Serpina5P70458 405 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Gbp1Q01514 589 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Aarsd1Q3THG9 412 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Anks6Q6GQX6 883 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Znf532Q6NXK2 1036 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Akap7Q7TN79 314 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Rnf168Q80XJ2 565 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Metap1Q8BP48 386 aaKnown RBP7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 PisdQ8BSF4 406 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Ace2Q8R0I0 805 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Timd2Q8R183 305 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Fam114a2Q8VE88 497 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Q9CQC3 228 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Fam212aQ9CX62 282 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Ttc33Q9D6K7 262 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Acot1O55137 419 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Ranbp1P34022 203 aaKnown RBP7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Anxa5P48036 319 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Fads2p1Q0VAX3 487 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Znf800Q0VEE6 662 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Entpd7Q3TCT4 606 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Prl3a1Q78Y73 227 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Prr11Q8BHE0 368 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Rsad2Q8CBB9 362 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 PhykplQ8R1K4 467 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Afg3l1Q920A7 789 aaKnown RBP7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Cox16Q9CR63 106 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Rasgef1cQ9D300 466 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Noxred1Q9D3S5 366 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Trhr2Q9ERT2 382 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Krt27Q9Z320 448 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Rpl9-ps1S4R1R7 191 aa7.88□□□□□ -1.15
Usp40-204ENSMUST00000187758 Capn2O08529 700 aa7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Pex5O09012 639 aa7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Cd72P21855 354 aa7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Gja8P28236 440 aa7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Btbd1P58544 488 aa7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Gabrb2P63137 512 aa7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Slc2a12Q8BFW9 622 aa7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Trim6Q8BGE7 488 aa7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Pak4Q8BTW9 593 aa7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Arhgef33Q8BW86 850 aa7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Snx9Q91VH2 595 aa7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Pcdhb1Q91Y08 818 aa7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Ugp2Q91ZJ5 508 aa7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Mcrs1Q99L90 462 aa7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Ddx24Q9ESV0 857 aaKnown RBP7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Zranb2Q9R020 330 aaKnown RBP7.87□□□□□ -1.15
Usp40-204ENSMUST00000187758 Tle2Q9WVB2 767 aa7.87□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms