RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 PrebQ9WUQ2 417 aa12.95□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Stau1Q9Z108 487 aaKnown RBP12.95□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Gadd45gQ9Z111 159 aa12.95□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Rpl9-ps1S4R1R7 191 aa12.95□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Alpk2Q91ZB0 2144 aa12.95□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 H2-T24F8VQG4 363 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Nr1i3O35627 358 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 TyrP11344 533 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 AgtP11859 477 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 PtmaP26350 111 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Pik3caP42337 1068 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Fgf13P70377 245 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 SynaQ5G5D5 617 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Dnajc1Q61712 552 aaKnown RBP12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Eif2b4Q61749 524 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 DazlQ64368 298 aaKnown RBP12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Defb34Q7TNV8 81 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 RragaQ80X95 313 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Slc41a1Q8BJA2 512 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 B130006D01RikQ8BRH6 153 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Tgif2Q8C0Y1 237 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Scrn2Q8VCA8 425 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Taf12Q8VE65 161 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Snx9Q91VH2 595 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Ube2sQ921J4 223 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Acbd6Q9D061 282 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Gtf3c6Q9D8P7 227 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Rwdd2aQ9D9S3 292 aa12.94□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Gm5483B2RV77 97 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 TpteG5E8H5 664 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Mup13L7N222 235 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Mllt10O54826 1068 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Cldn5O54942 218 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Hmga1P17095 107 aaKnown RBP12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 PdgfbP31240 241 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Kcnj2P35561 428 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Btg3P50615 252 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Gabrr2P56476 465 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Ect2Q07139 913 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Krt80Q0VBK2 452 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Grm2Q14BI2 872 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Q3TQQ9 903 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Ube2zQ3UE37 356 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Ppp4r3cQ3V0Y1 813 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Grik1Q60934 836 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Rftn1Q6A0D4 554 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Prmt8Q6PAK3 394 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 R3hdm2Q80TM6 1044 aaKnown RBP12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Tmem169Q8BG50 297 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 CptpQ8BS40 216 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Dnm3Q8BZ98 863 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Ano2Q8CFW1 1002 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Kat5Q8CHK4 513 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Zmiz2Q8CIE2 920 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Calhm5Q8R100 309 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Acsf2Q8VCW8 615 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Fam114a2Q8VE88 497 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Znf622Q91VY9 476 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Fam49bQ921M7 324 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Col25a1Q99MQ5 666 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Lpin3Q99PI4 848 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Lrrc17Q9CXD9 443 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 DlstQ9D2G2 454 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Rab11fip1Q9D620 645 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Smg9Q9DB90 520 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Nme7Q9QXL8 395 aa12.93□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Rtl9Q32KG4 1339 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Skint8A7XV07 398 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Gm28042B7ZCM9 1014 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Tgfbr3lD3YZZ2 297 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Gm10720D3Z1I5 223 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Zfp266E9Q2S7 604 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Gm10378F6XQQ1 160 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Cacna2d1O08532 1103 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Hmx1O70218 332 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 PrphP15331 475 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Uba1yP31254 1058 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Slc11a2P49282 568 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Cntn3Q07409 1028 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Q3TTJ4 293 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Srbd1Q497V5 1015 aaKnown RBP12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Grhl3Q5FWH3 603 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Cpa4Q6P8K8 420 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Mindy1Q76LS9 468 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Arhgap15Q811M1 481 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Haus4Q8BFT2 363 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Slco2b1Q8BXB6 683 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Lancl3Q8CD19 420 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Hmgcll1Q8JZS7 343 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Lrrc14Q8VC16 493 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Nle1Q8VEJ4 485 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 NonoQ99K48 473 aaKnown RBP12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Mageb16Q9CWV4 363 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Rfc5Q9D0F6 339 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Dlgap1Q9D415 992 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Kbtbd12Q9D618 625 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Rnf14Q9JI90 485 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Noc2lQ9WV70 747 aaKnown RBP12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Anapc7Q9WVM3 565 aa12.92□□□□□ -0.34
Ccdc28a-203ENSMUST00000173243 Rev3lQ61493 3122 aa12.92□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms