RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Vmn1r218Q8R261 298 aa17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Tbrg4Q91YM4 630 aaKnown RBP17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Pdk3Q922H2 415 aaKnown RBP17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Msh5Q9QUM7 833 aa17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Sh2d3cQ9QZS8 854 aa17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Galnt4O08832 578 aa17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 TxnP10639 105 aaKnown RBP17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Il1rapl1P59823 695 aa17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 ScinQ60604 715 aa17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Dna2Q6ZQJ5 1062 aa17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 AarsQ8BGQ7 968 aa17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Nod1Q8BHB0 953 aa17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Fbxo28Q8BIG4 368 aa17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 ItchQ8C863 864 aa17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Serpina3nQ91WP6 418 aa17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Mtfr1lQ9CWE0 289 aa17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 CinpQ9D0V8 212 aa17.98■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Ptprn2P80560 1001 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 TraddQ3U0V2 310 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Syce2Q505B8 171 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Tmcc1Q69ZZ6 649 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Fam120bQ6RI63 786 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Cd300ldQ8VCH2 221 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 NenfQ9CQ45 171 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 CenpkQ9ESN5 271 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Habp4Q9JKS5 411 aaKnown RBP17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Gcnt4E9Q649 455 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Mpp3O88910 568 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Nt5c2Q3V1L4 560 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Zfp512bQ6PHP4 879 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Kcnt1Q6ZPR4 1224 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Olfr670Q7TRP3 312 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Lrfn2Q80TG9 788 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Cib4Q9D9N5 185 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Rasgrp2Q9QUG9 608 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Actl7aQ9QY84 440 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Ap4b1Q9WV76 738 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 R3hdm1E9Q9Q2 1135 aaKnown RBP17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Nfe2Q07279 373 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 4930502E18RikQ14BQ3 236 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Togaram2Q3TYG6 1002 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Myo1dQ5SYD0 1006 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Cyp3a13Q64464 503 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 B3galnt2Q8BG28 504 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Sun2Q8BJS4 731 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Wdr47Q8CGF6 920 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Slc44a4Q91VA1 707 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Vps11Q91W86 941 aaKnown RBP17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Ppp1r3aQ99MR9 1089 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Tmem39aQ9CYC3 486 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 LactbQ9EP89 551 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Aff4Q9ESC8 1160 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Deaf1Q9Z1T5 566 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Gm16430A6X8J1 155 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Il1rl1P14719 567 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Sstr1P30873 391 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Mbl1P39039 239 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Btbd10Q80X66 475 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Colgalt1Q8K297 617 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 E2f4Q8R0K9 410 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Stk32bQ9JJX8 414 aa17.97■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Gm8922F6XVS9 199 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Guca2bO09051 106 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 CrymO54983 313 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Hoxb8P09632 243 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 ArP19091 899 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Bcat1P24288 386 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Cct7P80313 544 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Thap3Q8BJ25 218 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Dedd2Q8QZV0 330 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Ndufa10Q99LC3 355 aaKnown RBP17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 GOLGA7BQ9D428 167 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Tm9sf1Q9DBU0 606 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 RalbQ9JIW9 206 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Gm8113E0CXS8 587 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Gspt2Q149F3 632 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Rusc1Q8BG26 893 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Gga3Q8BMI3 718 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Atg14Q8CDJ3 492 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Rps6kl1Q8R2S1 544 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Pitpnm2Q6ZPQ6 1335 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Sall1Q9ER74 1322 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Itga9B8JK39 1036 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 BhmtO35490 407 aaKnown RBP17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Mmp20P57748 482 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Spc25Q3UA16 226 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 MyrfQ3UR85 1138 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 CcnjlQ5SRT8 387 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Klra6Q60653 266 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Gpatch2lQ6PE65 482 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Katnal2Q9D3R6 539 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Sv2aQ9JIS5 742 aa17.96■□□□□ 0.47
Ebf3-204ENSMUST00000169486 Csn1s1P19228 313 aa17.96■□□□□ 0.46
Ebf3-204ENSMUST00000169486 NfibP97863 570 aaKnown RBP17.96■□□□□ 0.46
Ebf3-204ENSMUST00000169486 Cdk16Q04735 496 aa17.96■□□□□ 0.46
Ebf3-204ENSMUST00000169486 Calb2Q08331 271 aa17.96■□□□□ 0.46
Ebf3-204ENSMUST00000169486 C2cd2lQ80X80 706 aa17.96■□□□□ 0.46
Ebf3-204ENSMUST00000169486 Pi4kbQ8BKC8 816 aa17.96■□□□□ 0.46
Ebf3-204ENSMUST00000169486 Senp7Q8BUH8 1037 aa17.96■□□□□ 0.46
Ebf3-204ENSMUST00000169486 Ythdf3Q8BYK6 585 aaKnown RBP17.96■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms