RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Nr1h3Q9Z0Y9 445 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Pck1Q9Z2V4 622 aa16.68■□□□□ 0.26
Trim39-203ENSMUST00000113706 Igf2rQ07113 2483 aaKnown RBP16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Rnf19bA2A7Q9 732 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 ZxdbA2CE44 873 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 DffaO54786 331 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 StrnO55106 780 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Sept4P28661 478 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Pkn1P70268 946 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Cyp4f37Q3V1F1 546 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gm5168Q4KL04 211 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Tshz2Q68FE9 1030 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Nlrp4aQ8BU40 982 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Pyhin1Q8BV49 420 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Q8CCC3 530 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Epn3Q91W69 636 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Isl2Q9CXV0 359 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Fundc1Q9DB70 155 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Dnajb7Q9QYI8 312 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gys1Q9Z1E4 738 aaKnown RBP16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Orc1Q9Z1N2 840 aaKnown RBP16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Prpmp5E9PXN1 296 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 TnfP06804 235 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 RarbP22605 482 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 TwistnbQ78WZ7 330 aaKnown RBP16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Zswim6Q80TB7 1207 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Slc35f6Q8VE96 372 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Asah2Q9JHE3 756 aa16.67■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gm12800B1AUV4 484 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gm12794L7MTS5 483 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Trappc3O55013 180 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Runx2Q08775 607 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Cracr2aQ3UP38 310 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Phlda1Q62392 405 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gpatch2lQ6PE65 482 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Apol7cQ8C6E1 369 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Tp53inp2Q8CFU8 221 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Sbk1Q8QZX0 417 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Pcdhb1Q91Y08 818 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Ttc33Q9D6K7 262 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gtf2ird1Q9JI57 1104 aaKnown RBP16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Tbc1d16A2ABG4 766 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gml2G5E8L7 176 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Vmn2r1O70410 912 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Hsd17b2P51658 381 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Pcsk1P63239 753 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Tmprss15P97435 1069 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Ndst1Q3UHN9 882 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Cfhr2Q4LDF6 332 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Ccdc85aQ5SP85 500 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Dars2Q8BIP0 653 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Aste1Q8BIR2 672 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Olfr30Q8VGD8 315 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Afg3l1Q920A7 789 aaKnown RBP16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Lmo2P25801 158 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 RxrbP28704 520 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Bcar1Q61140 874 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Phtf2Q8CB19 747 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Anxa9Q9JHQ0 345 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Slc22a3Q9WTW5 551 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Anapc7Q9WVM3 565 aa16.66■□□□□ 0.26
Trim39-203ENSMUST00000113706 Farp1F8VPU2 1048 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Atp9bP98195 1146 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Elf3Q3UPW2 391 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Uba6Q8C7R4 1053 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Trps1Q925H1 1281 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Cacng4Q9JJV4 327 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Cetn2Q9R1K9 172 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Fermt1P59113 677 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Fam107bQ3TGF2 131 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Syne3Q4FZC9 975 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Papd5Q68ED3 633 aaKnown RBP16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Rsl1d1Q8BVY0 452 aaKnown RBP16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Olfr1494Q8VGP8 315 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 DarsQ922B2 501 aaKnown RBP16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Rpa3Q9CQ71 121 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Psmg1Q9JK23 289 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Trpc2Q9R244 1172 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Trpv2Q9WTR1 756 aa16.65■□□□□ 0.26
Trim39-203ENSMUST00000113706 Adam19O35674 920 aa16.64■□□□□ 0.26
Trim39-203ENSMUST00000113706 Acsl1P41216 699 aa16.64■□□□□ 0.26
Trim39-203ENSMUST00000113706 Cops2P61202 443 aaKnown RBP16.64■□□□□ 0.26
Trim39-203ENSMUST00000113706 Pid1Q3UBG2 217 aa16.64■□□□□ 0.26
Trim39-203ENSMUST00000113706 Taf5Q8C092 801 aa16.64■□□□□ 0.26
Trim39-203ENSMUST00000113706 FcrlaQ920A9 352 aa16.64■□□□□ 0.26
Trim39-203ENSMUST00000113706 Slamf8Q9D3G2 278 aa16.64■□□□□ 0.26
Trim39-203ENSMUST00000113706 Gdap2Q9DBL2 498 aa16.64■□□□□ 0.26
Trim39-203ENSMUST00000113706 B4galt4Q9JJ04 344 aa16.64■□□□□ 0.26
Trim39-203ENSMUST00000113706 PigoQ9JJI6 1093 aa16.64■□□□□ 0.26
Trim39-203ENSMUST00000113706 Krt71Q9R0H5 524 aa16.64■□□□□ 0.26
Trim39-203ENSMUST00000113706 Plxna1P70206 1894 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Igkv10-96A0A140T8M1 115 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Zfp358E9Q8M1 571 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Ptcd3Q14C51 685 aaKnown RBP16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Q3TQQ9 903 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Rnf10Q3UIW5 804 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 CochQ62507 552 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Prl3a1Q78Y73 227 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 L3mbtl3Q8BLB7 883 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Tarsl2Q8BLY2 790 aa16.64■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms